Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01572

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
1,728,396	+		MIT1002_01570	0.54	+1.3
1,728,416	-		MIT1002_01570	0.55	+1.5
1,728,464	+		MIT1002_01570	0.59	+0.6
1,728,464	+		MIT1002_01570	0.59	+0.8
1,728,491	+		MIT1002_01570	0.61	+0.0
1,728,501	+		MIT1002_01570	0.62	+0.0
1,728,574	-		MIT1002_01570	0.67	-0.8
1,728,668	+		MIT1002_01570	0.75	+0.1
1,728,668	+		MIT1002_01570	0.75	-1.9
1,728,702	-		MIT1002_01570	0.77	-1.9
1,728,730	+		MIT1002_01570	0.79	-0.8
1,728,792	+		MIT1002_01570	0.84	-0.3
1,728,800	-		MIT1002_01570	0.85	+0.1
1,728,845	+		MIT1002_01570	0.88	-0.8
1,728,845	+		MIT1002_01570	0.88	+0.3
1,728,956	-				+1.3
1,729,076	-		MIT1002_01571	0.23	-0.9
1,729,132	+		MIT1002_01571	0.40	-1.2
1,729,140	-		MIT1002_01571	0.42	-0.4
1,729,159	+		MIT1002_01571	0.48	+1.8
1,729,159	+		MIT1002_01571	0.48	-1.0
1,729,159	+		MIT1002_01571	0.48	-2.4
1,729,159	+		MIT1002_01571	0.48	-2.0
1,729,159	+		MIT1002_01571	0.48	-1.1
1,729,165	-		MIT1002_01571	0.50	-1.1
1,729,167	-		MIT1002_01571	0.50	-1.7
1,729,167	-		MIT1002_01571	0.50	-0.7
1,729,237	+		MIT1002_01571	0.72	+0.7
1,729,245	+		MIT1002_01571	0.74	+0.7
1,729,261	-		MIT1002_01571	0.79	-1.9
1,729,265	+		MIT1002_01571	0.80	+2.0
1,729,265	+		MIT1002_01571	0.80	+0.2
1,729,265	+		MIT1002_01571	0.80	-2.2
1,729,273	-		MIT1002_01571	0.83	-0.6
1,729,273	-		MIT1002_01571	0.83	-1.7
1,729,280	-		MIT1002_01571	0.85	-0.5
1,729,393	-				-0.9
1,729,393	-				-3.3
1,729,398	-				-0.2
1,729,466	+		MIT1002_01572	0.16	+0.5
1,729,613	+		MIT1002_01572	0.45	+0.0
1,729,747	-		MIT1002_01572	0.71	-0.7
1,729,786	-		MIT1002_01572	0.79	-1.2
1,729,836	-		MIT1002_01572	0.89	-0.3
1,729,945	-				+0.7
1,730,043	-		MIT1002_01573	0.18	+1.2
1,730,154	-		MIT1002_01573	0.30	+1.4
1,730,156	+		MIT1002_01573	0.31	+0.3
1,730,193	-		MIT1002_01573	0.35	+0.1
1,730,195	-		MIT1002_01573	0.35	+0.1
1,730,232	+		MIT1002_01573	0.39	-0.2
1,730,272	-		MIT1002_01573	0.44	+0.6
1,730,295	-		MIT1002_01573	0.46	+0.9
1,730,363	+		MIT1002_01573	0.54	+1.3
1,730,430	+		MIT1002_01573	0.61	+0.7
1,730,430	+		MIT1002_01573	0.61	+0.1
1,730,460	-		MIT1002_01573	0.64	+0.4
1,730,460	-		MIT1002_01573	0.64	-1.9
1,730,466	+		MIT1002_01573	0.65	+1.7
1,730,471	+		MIT1002_01573	0.66	+1.7
1,730,474	-		MIT1002_01573	0.66	+0.7
1,730,476	+		MIT1002_01573	0.66	-3.0
1,730,476	+		MIT1002_01573	0.66	+0.6
1,730,484	-		MIT1002_01573	0.67	-0.5
1,730,509	-		MIT1002_01573	0.70	-0.2
1,730,527	-		MIT1002_01573	0.72	-0.2
1,730,537	+		MIT1002_01573	0.73	+0.3
1,730,543	-		MIT1002_01573	0.74	-0.9
1,730,589	-		MIT1002_01573	0.79	+0.1
1,730,607	+		MIT1002_01573	0.81	+0.2
1,730,641	+		MIT1002_01573	0.85	-0.3
1,730,670	-		MIT1002_01573	0.88	-0.1
1,730,707	-				-0.4
1,730,726	-				+0.2
1,730,743	-				+0.9
1,730,803	+				+0.4
1,730,808	+				-2.1
1,730,843	-				+0.3
1,730,848	-				-0.6
1,730,849	+				+0.9