Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01534

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
1,684,985	-				-0.6
1,685,010	-				-2.2
1,685,124	+		MIT1002_01533	0.11	-1.0
1,685,169	-		MIT1002_01533	0.17	-1.7
1,685,171	-		MIT1002_01533	0.17	+0.1
1,685,223	-		MIT1002_01533	0.24	-1.0
1,685,297	-		MIT1002_01533	0.33	-0.6
1,685,302	-		MIT1002_01533	0.34	-0.1
1,685,307	+		MIT1002_01533	0.35	-2.2
1,685,338	-		MIT1002_01533	0.39	-2.2
1,685,569	-		MIT1002_01533	0.68	-0.4
1,685,569	-		MIT1002_01533	0.68	-1.2
1,685,659	+		MIT1002_01533	0.80	-0.5
1,685,688	-		MIT1002_01533	0.83	-0.1
1,685,819	-				-1.0
1,685,829	+				-0.2
1,685,837	-				-0.7
1,685,871	+				-2.7
1,685,914	+				+0.3
1,685,914	+				+3.4
1,685,922	-				+0.3
1,685,941	+				+0.2
1,685,941	+				+0.0
1,686,009	+				+0.3
1,686,017	-				+0.5
1,686,041	+		MIT1002_01534	0.11	+0.1
1,686,041	+		MIT1002_01534	0.11	-1.0
1,686,049	-		MIT1002_01534	0.11	-1.4
1,686,183	+		MIT1002_01534	0.19	-0.7
1,686,200	-		MIT1002_01534	0.20	+0.2
1,686,233	-		MIT1002_01534	0.22	+0.5
1,686,263	-		MIT1002_01534	0.24	-0.1
1,686,277	+		MIT1002_01534	0.25	+0.3
1,686,286	-		MIT1002_01534	0.25	-0.4
1,686,299	-		MIT1002_01534	0.26	-0.1
1,686,326	-		MIT1002_01534	0.28	+0.6
1,686,489	+		MIT1002_01534	0.38	-0.8
1,686,505	-		MIT1002_01534	0.39	+0.6
1,686,571	+		MIT1002_01534	0.43	-0.4
1,686,579	-		MIT1002_01534	0.43	-0.5
1,686,599	+		MIT1002_01534	0.44	-1.1
1,686,606	-		MIT1002_01534	0.45	-1.0
1,686,607	-		MIT1002_01534	0.45	-1.8
1,686,644	-		MIT1002_01534	0.47	+1.7
1,686,665	+		MIT1002_01534	0.48	-0.3
1,686,710	-		MIT1002_01534	0.51	+0.2
1,686,779	+		MIT1002_01534	0.55	-1.0
1,686,838	+		MIT1002_01534	0.59	-0.2
1,686,929	-		MIT1002_01534	0.64	-0.1
1,686,932	+		MIT1002_01534	0.64	+0.7
1,686,970	+		MIT1002_01534	0.67	-0.8
1,687,007	-		MIT1002_01534	0.69	-0.7
1,687,116	+		MIT1002_01534	0.76	-0.3
1,687,188	-		MIT1002_01534	0.80	-1.0
1,687,325	+		MIT1002_01534	0.88	-1.2
1,687,325	+		MIT1002_01534	0.88	-1.3
1,687,718	+				-0.4
1,687,766	+				+0.6
1,687,767	-				-0.9
1,687,774	-				-2.2
1,687,813	+				-0.2
1,687,821	-				+0.4
1,687,821	-				+0.5
1,687,821	-				+1.1
1,687,874	-				+0.2
1,687,944	+				-0.4
1,687,968	-				-0.2
1,688,023	-		MIT1002_01535	0.12	+0.1
1,688,106	+		MIT1002_01535	0.15	-2.2
1,688,114	-		MIT1002_01535	0.15	-0.7
1,688,114	-		MIT1002_01535	0.15	-0.8
1,688,114	-		MIT1002_01535	0.15	-3.1
1,688,114	-		MIT1002_01535	0.15	-0.2
1,688,114	-		MIT1002_01535	0.15	-1.5
1,688,114	-		MIT1002_01535	0.15	-3.4
1,688,268	+		MIT1002_01535	0.21	+0.7
1,688,332	-		MIT1002_01535	0.24	+2.7
1,688,332	-		MIT1002_01535	0.24	-0.2
1,688,357	-		MIT1002_01535	0.25	+0.1
1,688,378	-		MIT1002_01535	0.26	+2.9
1,688,403	-		MIT1002_01535	0.27	-0.1
1,688,403	-		MIT1002_01535	0.27	-1.3
1,688,406	+		MIT1002_01535	0.27	+1.6