Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01446

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
1,589,270	-				+0.7
1,589,296	+				-1.5
1,590,229	-				-0.4
1,590,236	-				-0.2
1,590,246	-				-1.0
1,590,246	-				-1.2
1,590,253	-				-0.3
1,590,293	+				+0.9
1,590,303	+				+0.5
1,590,311	-				+0.6
1,590,311	-				+0.7
1,590,311	-				+0.5
1,590,342	+				-0.5
1,590,410	+				-1.2
1,590,557	-		MIT1002_01446	0.13	-0.5
1,590,579	-		MIT1002_01446	0.14	+0.5
1,590,591	+		MIT1002_01446	0.15	+1.8
1,590,599	-		MIT1002_01446	0.15	+0.2
1,590,685	+		MIT1002_01446	0.19	-1.9
1,590,685	+		MIT1002_01446	0.19	-0.2
1,590,692	+		MIT1002_01446	0.19	+0.6
1,590,693	-		MIT1002_01446	0.19	+1.9
1,590,693	-		MIT1002_01446	0.19	+0.8
1,590,710	-		MIT1002_01446	0.20	-1.3
1,590,751	-		MIT1002_01446	0.21	+0.1
1,590,752	-		MIT1002_01446	0.21	+0.9
1,590,833	+		MIT1002_01446	0.25	+2.5
1,590,841	-		MIT1002_01446	0.25	+0.9
1,590,846	-		MIT1002_01446	0.25	-1.1
1,590,867	+		MIT1002_01446	0.26	+1.5
1,590,867	+		MIT1002_01446	0.26	+1.0
1,590,875	-		MIT1002_01446	0.27	+3.2
1,590,903	+		MIT1002_01446	0.28	-0.6
1,590,909	+		MIT1002_01446	0.28	-1.2
1,590,911	-		MIT1002_01446	0.28	-1.5
1,590,911	-		MIT1002_01446	0.28	-1.4
1,590,950	+		MIT1002_01446	0.30	+0.5
1,590,996	+		MIT1002_01446	0.32	-1.3
1,590,997	+		MIT1002_01446	0.32	-0.9
1,591,014	+		MIT1002_01446	0.33	+0.8
1,591,014	+		MIT1002_01446	0.33	-0.1
1,591,022	-		MIT1002_01446	0.33	-0.7
1,591,039	-		MIT1002_01446	0.34	+2.7
1,591,069	+		MIT1002_01446	0.35	-1.0
1,591,153	-		MIT1002_01446	0.38	-0.1
1,591,201	-		MIT1002_01446	0.40	-1.2
1,591,293	+		MIT1002_01446	0.44	-1.3
1,591,293	+		MIT1002_01446	0.44	+0.9
1,591,293	+		MIT1002_01446	0.44	+0.0
1,591,427	-		MIT1002_01446	0.50	+0.6
1,591,507	+		MIT1002_01446	0.53	-1.4
1,591,554	+		MIT1002_01446	0.55	+0.9
1,591,681	-		MIT1002_01446	0.61	-2.3
1,591,721	-		MIT1002_01446	0.63	+0.2
1,591,723	+		MIT1002_01446	0.63	-0.1
1,591,723	+		MIT1002_01446	0.63	+0.6
1,591,729	-		MIT1002_01446	0.63	-0.3
1,591,731	-		MIT1002_01446	0.63	+1.3
1,591,731	-		MIT1002_01446	0.63	-1.5
1,591,731	-		MIT1002_01446	0.63	-0.1
1,591,750	+		MIT1002_01446	0.64	-0.5
1,591,770	+		MIT1002_01446	0.65	-1.4
1,591,916	-		MIT1002_01446	0.71	-2.7
1,591,941	+		MIT1002_01446	0.72	+1.7
1,591,966	+		MIT1002_01446	0.73	+0.7
1,592,000	+		MIT1002_01446	0.74	+0.6
1,592,009	-		MIT1002_01446	0.75	+1.9
1,592,015	+		MIT1002_01446	0.75	-0.1
1,592,023	-		MIT1002_01446	0.75	-0.6
1,592,026	+		MIT1002_01446	0.75	-0.2
1,592,041	+		MIT1002_01446	0.76	+1.1
1,592,044	-		MIT1002_01446	0.76	-1.3
1,592,049	+		MIT1002_01446	0.76	+1.2
1,592,056	+		MIT1002_01446	0.77	+0.1
1,592,066	+		MIT1002_01446	0.77	+0.1
1,592,074	-		MIT1002_01446	0.77	-0.5
1,592,090	+		MIT1002_01446	0.78	-0.7
1,592,113	+		MIT1002_01446	0.79	-0.1
1,592,150	+		MIT1002_01446	0.81	+0.1
1,592,150	+		MIT1002_01446	0.81	+1.0
1,592,164	-		MIT1002_01446	0.81	-2.1
1,592,308	+		MIT1002_01446	0.87	-1.6
1,592,318	+		MIT1002_01446	0.88	-1.7
1,592,318	+		MIT1002_01446	0.88	-2.5
1,592,333	-		MIT1002_01446	0.88	+1.2
1,592,365	+		MIT1002_01446	0.90	-1.0
1,592,366	+		MIT1002_01446	0.90	+0.1
1,592,429	+				+0.5
1,592,435	-				+2.0
1,592,437	-				-1.8
1,592,458	-				-1.0
1,592,518	+				+0.3
1,592,518	+				-0.6
1,592,518	+				+0.9
1,592,526	-				+0.0
1,592,526	-				+0.8
1,592,542	-				-0.7
1,592,624	+				-0.1
1,592,632	-				+0.5
1,592,634	+				+0.4
1,592,683	-				-0.3
1,592,745	-				+0.2
1,592,781	-				-0.3
1,592,781	-				-0.7
1,592,785	+				+0.5
1,592,847	+				-0.7
1,592,855	-				-0.3
1,592,897	+				+0.6
1,592,921	+				+0.2
1,592,923	-				-0.8
1,592,923	-				-0.3
1,592,924	-				+1.3
1,592,930	-				+0.0
1,592,943	+		MIT1002_01447	0.10	+0.1
1,592,943	+		MIT1002_01447	0.10	-1.2
1,592,966	-		MIT1002_01447	0.12	+0.7
1,592,967	-		MIT1002_01447	0.12	-1.2
1,592,975	+		MIT1002_01447	0.13	+0.4
1,592,993	+		MIT1002_01447	0.14	-0.9
1,593,034	-		MIT1002_01447	0.18	-0.5
1,593,047	+		MIT1002_01447	0.19	+1.1
1,593,047	+		MIT1002_01447	0.19	+1.8
1,593,052	+		MIT1002_01447	0.19	+1.4
1,593,055	-		MIT1002_01447	0.20	+0.2
1,593,062	+		MIT1002_01447	0.20	+1.3
1,593,070	-		MIT1002_01447	0.21	-1.1
1,593,070	-		MIT1002_01447	0.21	-3.1
1,593,103	+		MIT1002_01447	0.24	+0.1
1,593,231	+		MIT1002_01447	0.35	+2.3
1,593,239	-		MIT1002_01447	0.35	-0.4
1,593,262	-		MIT1002_01447	0.37	+0.2
1,593,316	+		MIT1002_01447	0.42	-0.4
1,593,335	+		MIT1002_01447	0.44	-0.8
1,593,343	-		MIT1002_01447	0.44	-0.0
1,593,421	+		MIT1002_01447	0.51	-1.5
1,593,427	-		MIT1002_01447	0.52	-0.3
1,593,429	-		MIT1002_01447	0.52	-0.5
1,593,429	-		MIT1002_01447	0.52	+0.6
1,593,479	-		MIT1002_01447	0.56	+0.6
1,593,494	+		MIT1002_01447	0.57	+0.9
1,593,494	+		MIT1002_01447	0.57	+0.6
1,593,511	+		MIT1002_01447	0.59	+0.4