Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00983

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
1,089,090	+				-1.3
1,089,106	+				-0.7
1,089,242	-				-0.6
1,089,252	-				+1.3
1,089,289	+		MIT1002_00982	0.20	-0.0
1,089,289	+		MIT1002_00982	0.20	-0.2
1,089,297	-		MIT1002_00982	0.23	+0.4
1,089,360	+		MIT1002_00982	0.43	+2.2
1,089,368	-		MIT1002_00982	0.45	+0.2
1,089,395	-		MIT1002_00982	0.54	+0.6
1,089,435	-		MIT1002_00982	0.66	+2.0
1,089,467	+		MIT1002_00982	0.77	+1.0
1,089,604	+				+0.8
1,089,612	+				-0.5
1,089,665	-				+0.8
1,089,665	-				-1.2
1,089,665	-				+1.4
1,089,684	+				+0.2
1,089,692	-				+0.1
1,089,708	+				-0.0
1,089,708	+				-0.4
1,089,709	-				+1.7
1,089,716	+				-2.5
1,089,799	+				+0.8
1,089,807	-				+0.3
1,089,807	-				+1.3
1,089,863	-				+1.0
1,089,955	+				-1.2
1,090,012	+		MIT1002_00983	0.14	-1.4
1,090,012	+		MIT1002_00983	0.14	-1.1
1,090,056	+		MIT1002_00983	0.18	-0.7
1,090,084	-		MIT1002_00983	0.21	-2.7
1,090,096	-		MIT1002_00983	0.22	-2.3
1,090,187	-		MIT1002_00983	0.31	-0.7
1,090,233	-		MIT1002_00983	0.36	-0.3
1,090,256	-		MIT1002_00983	0.38	+0.0
1,090,498	+		MIT1002_00983	0.62	-3.0
1,090,512	-		MIT1002_00983	0.63	-1.5
1,090,594	+		MIT1002_00983	0.72	-3.1
1,090,605	+		MIT1002_00983	0.73	+0.3
1,090,624	+		MIT1002_00983	0.75	-2.1
1,090,624	+		MIT1002_00983	0.75	+0.1
1,090,713	-		MIT1002_00983	0.83	-0.3
1,090,745	-		MIT1002_00983	0.87	-0.6
1,090,842	-				-0.5
1,090,882	+				-1.0
1,090,928	-				-0.3
1,091,008	-				-0.0
1,091,010	+				-0.3
1,091,048	+				+0.9
1,091,128	+				+0.2
1,091,128	+				+0.4
1,091,128	+				+3.1
1,091,128	+				+1.3
1,091,136	-				+1.1
1,091,183	+				+0.5
1,091,263	-				+1.0
1,091,263	-				+0.5
1,091,278	+		MIT1002_00984	0.10	+0.0
1,091,296	-		MIT1002_00984	0.12	-1.9
1,091,341	+		MIT1002_00984	0.14	-0.7
1,091,349	-		MIT1002_00984	0.15	+2.0
1,091,368	-		MIT1002_00984	0.16	+0.5
1,091,388	+		MIT1002_00984	0.17	+0.1
1,091,396	-		MIT1002_00984	0.18	+0.2
1,091,405	-		MIT1002_00984	0.18	-2.6
1,091,471	-		MIT1002_00984	0.22	+0.3
1,091,495	-		MIT1002_00984	0.24	+1.3
1,091,495	-		MIT1002_00984	0.24	+0.5
1,091,495	-		MIT1002_00984	0.24	+0.3
1,091,536	-		MIT1002_00984	0.26	-0.3
1,091,577	-		MIT1002_00984	0.29	-0.8
1,091,713	+		MIT1002_00984	0.37	-0.0
1,091,735	-		MIT1002_00984	0.39	-2.6
1,091,735	-		MIT1002_00984	0.39	-0.2
1,091,756	+		MIT1002_00984	0.40	+0.7
1,091,756	-		MIT1002_00984	0.40	+1.8
1,091,766	+		MIT1002_00984	0.41	-1.1
1,091,790	+		MIT1002_00984	0.42	+0.4