Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00459
Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6 |
|---|---|---|---|---|---|
| remove | |||||
| 503,175 | + | -0.2 | |||
| 503,180 | + | +0.5 | |||
| 504,662 | + | +2.0 | |||
| 504,662 | + | -0.9 | |||
| 504,667 | - | -3.7 | |||
| 504,670 | - | +0.9 | |||
| 504,670 | - | -1.7 | |||
| 504,670 | - | -0.5 | |||
| 504,821 | - | MIT1002_00460 | 0.21 | +0.7 | |
| 504,887 | - | MIT1002_00460 | 0.35 | +0.9 | |
| 504,955 | - | MIT1002_00460 | 0.50 | -0.4 | |
| 504,995 | + | MIT1002_00460 | 0.59 | +0.9 | |
| 505,157 | - | -0.7 | |||
| 505,197 | - | +0.1 | |||
| 505,198 | + | +0.3 | |||
| 505,307 | - | -0.9 | |||
| 505,307 | - | -0.4 | |||
| 505,317 | - | +0.1 | |||
| 505,343 | + | +0.0 | |||
| 505,351 | - | +0.4 | |||
| 505,351 | - | +0.2 | |||
| 505,431 | - | -0.8 | |||
| 505,431 | - | +0.8 |
Or see this region's nucleotide sequence