Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10230

Experiment: planktonic; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Aluminum chloride 1mM
2,285,636	-				-1.8
2,285,636	-				-0.0
2,285,753	+				-1.5
2,285,761	+				+0.0
2,285,818	-				-2.6
2,285,920	+				-1.4
2,285,920	+				-2.1
2,286,058	+		LRK53_RS10225	0.25	-0.6
2,286,058	+		LRK53_RS10225	0.25	+0.9
2,286,058	+		LRK53_RS10225	0.25	-1.8
2,286,059	-		LRK53_RS10225	0.25	-2.9
2,286,059	-		LRK53_RS10225	0.25	-1.6
2,286,100	+		LRK53_RS10225	0.31	-0.8
2,286,100	+		LRK53_RS10225	0.31	-2.2
2,286,100	+		LRK53_RS10225	0.31	-1.9
2,286,100	+		LRK53_RS10225	0.31	-1.0
2,286,100	+		LRK53_RS10225	0.31	-0.6
2,286,100	+		LRK53_RS10225	0.31	+1.3
2,286,100	+		LRK53_RS10225	0.31	-0.1
2,286,100	+		LRK53_RS10225	0.31	-0.6
2,286,100	+		LRK53_RS10225	0.31	-0.5
2,286,100	+		LRK53_RS10225	0.31	+0.1
2,286,100	+		LRK53_RS10225	0.31	+0.7
2,286,100	+		LRK53_RS10225	0.31	-1.8
2,286,100	+		LRK53_RS10225	0.31	-0.2
2,286,100	+		LRK53_RS10225	0.31	+1.7
2,286,100	+		LRK53_RS10225	0.31	+0.7
2,286,100	+		LRK53_RS10225	0.31	-0.2
2,286,101	-		LRK53_RS10225	0.31	-1.5
2,286,101	-		LRK53_RS10225	0.31	-0.9
2,286,101	-		LRK53_RS10225	0.31	+1.3
2,286,101	-		LRK53_RS10225	0.31	-1.6
2,286,101	-		LRK53_RS10225	0.31	-1.2
2,286,101	-		LRK53_RS10225	0.31	-2.6
2,286,101	-		LRK53_RS10225	0.31	+1.0
2,286,101	-		LRK53_RS10225	0.31	+0.6
2,286,101	-		LRK53_RS10225	0.31	+2.5
2,286,101	-		LRK53_RS10225	0.31	+0.9
2,286,101	-		LRK53_RS10225	0.31	-1.6
2,286,101	-		LRK53_RS10225	0.31	+0.1
2,286,101	-		LRK53_RS10225	0.31	-0.4
2,286,101	-		LRK53_RS10225	0.31	+2.0
2,286,101	-		LRK53_RS10225	0.31	-0.8
2,286,101	-		LRK53_RS10225	0.31	-1.5
2,286,101	-		LRK53_RS10225	0.31	+0.1
2,286,101	-		LRK53_RS10225	0.31	-2.7
2,286,101	-		LRK53_RS10225	0.31	+1.1
2,286,101	-		LRK53_RS10225	0.31	-2.1
2,286,101	-		LRK53_RS10225	0.31	+1.1
2,286,238	+		LRK53_RS10225	0.53	-0.1
2,286,238	+		LRK53_RS10225	0.53	-1.9
2,286,238	+		LRK53_RS10225	0.53	-1.0
2,286,239	-		LRK53_RS10225	0.53	-2.1
2,286,239	-		LRK53_RS10225	0.53	-1.3
2,286,239	-		LRK53_RS10225	0.53	-1.5
2,286,239	-		LRK53_RS10225	0.53	-1.2
2,286,260	-		LRK53_RS10225	0.57	-1.3
2,286,260	-		LRK53_RS10225	0.57	-2.9
2,286,394	+		LRK53_RS10225	0.78	-0.4
2,286,395	-		LRK53_RS10225	0.78	-1.1
2,286,395	-		LRK53_RS10225	0.78	-0.1
2,286,397	+		LRK53_RS10225	0.79	-0.9
2,286,398	-		LRK53_RS10225	0.79	-1.6
2,286,398	-		LRK53_RS10225	0.79	-0.6
2,286,501	+				+0.0
2,286,501	+				+0.5
2,286,501	+				-0.0
2,286,502	-				-1.7
2,286,615	+				-0.1
2,286,615	+				-0.1
2,286,615	+				-0.3
2,286,615	+				+0.1
2,286,615	+				-2.3
2,286,615	+				-1.4
2,286,615	+				-1.0
2,286,615	+				+0.4
2,286,615	+				-2.7
2,286,615	+				-1.1
2,286,615	+				-1.2
2,286,615	+				-0.3
2,286,616	-				-0.3
2,286,616	-				-0.4
2,286,616	-				-0.7
2,286,616	-				-1.5
2,286,616	-				-0.8
2,286,616	-				-1.4
2,286,616	-				-0.7
2,286,616	-				-0.7
2,286,616	-				-0.8
2,286,617	+				-0.1
2,286,619	+				+0.4
2,286,619	+				-1.4
2,286,620	-				-0.8
2,286,620	-				+0.6
2,286,620	-				+0.9
2,286,620	-				-2.8
2,286,620	-				-1.2
2,286,620	-				-0.6
2,286,620	-				-1.4
2,286,620	-				+0.6
2,286,620	-				-1.9
2,286,620	-				-0.9
2,286,620	-				-1.0
2,286,620	-				-0.5
2,286,620	-				-1.4
2,286,620	-				-0.5
2,286,620	-				-2.3
2,286,661	+		LRK53_RS10230	0.12	-0.2
2,286,661	+		LRK53_RS10230	0.12	-0.5
2,286,661	+		LRK53_RS10230	0.12	-0.1
2,286,662	-		LRK53_RS10230	0.12	+1.2
2,286,662	-		LRK53_RS10230	0.12	-0.3
2,286,662	-		LRK53_RS10230	0.12	-0.2
2,286,662	-		LRK53_RS10230	0.12	-0.7
2,286,674	+		LRK53_RS10230	0.13	-3.0
2,286,674	+		LRK53_RS10230	0.13	-1.5
2,286,675	-		LRK53_RS10230	0.13	+0.5
2,286,676	+		LRK53_RS10230	0.13	-2.0
2,286,752	-		LRK53_RS10230	0.19	-1.9
2,286,813	+		LRK53_RS10230	0.25	+0.4
2,286,813	+		LRK53_RS10230	0.25	-1.4
2,286,814	-		LRK53_RS10230	0.25	-2.2
2,286,814	-		LRK53_RS10230	0.25	-1.0
2,286,979	+		LRK53_RS10230	0.39	-1.9
2,286,979	+		LRK53_RS10230	0.39	-0.5
2,286,980	-		LRK53_RS10230	0.39	-2.4
2,287,012	+		LRK53_RS10230	0.42	-2.3
2,287,012	+		LRK53_RS10230	0.42	-1.1
2,287,012	+		LRK53_RS10230	0.42	-1.2
2,287,012	+		LRK53_RS10230	0.42	-0.5
2,287,012	+		LRK53_RS10230	0.42	-0.8
2,287,012	+		LRK53_RS10230	0.42	-0.2
2,287,012	+		LRK53_RS10230	0.42	-1.7
2,287,013	-		LRK53_RS10230	0.42	-1.1
2,287,013	-		LRK53_RS10230	0.42	-0.5
2,287,013	-		LRK53_RS10230	0.42	-1.2
2,287,013	-		LRK53_RS10230	0.42	-1.0
2,287,013	-		LRK53_RS10230	0.42	-0.7
2,287,013	-		LRK53_RS10230	0.42	-0.6
2,287,071	+		LRK53_RS10230	0.47	-2.7
2,287,071	+		LRK53_RS10230	0.47	-0.6
2,287,071	+		LRK53_RS10230	0.47	-0.6
2,287,071	+		LRK53_RS10230	0.47	-2.1
2,287,071	+		LRK53_RS10230	0.47	-0.4
2,287,072	-		LRK53_RS10230	0.47	-1.1
2,287,072	-		LRK53_RS10230	0.47	+0.4
2,287,072	-		LRK53_RS10230	0.47	-0.6
2,287,072	-		LRK53_RS10230	0.47	-1.1
2,287,072	-		LRK53_RS10230	0.47	-0.5
2,287,105	-		LRK53_RS10230	0.50	-0.2
2,287,185	+		LRK53_RS10230	0.57	-1.2
2,287,186	-		LRK53_RS10230	0.57	-0.7
2,287,186	-		LRK53_RS10230	0.57	-1.8
2,287,257	+		LRK53_RS10230	0.63	-0.6
2,287,258	-		LRK53_RS10230	0.63	-1.9
2,287,258	-		LRK53_RS10230	0.63	-0.9
2,287,275	+		LRK53_RS10230	0.64	-2.0
2,287,276	-		LRK53_RS10230	0.64	-1.0
2,287,419	+		LRK53_RS10230	0.77	-1.6
2,287,419	+		LRK53_RS10230	0.77	-2.2
2,287,539	+		LRK53_RS10230	0.87	-0.5
2,287,540	-		LRK53_RS10230	0.87	-2.2
2,287,568	+		LRK53_RS10230	0.89	-1.9
2,287,568	+		LRK53_RS10230	0.89	+0.4
2,287,569	-		LRK53_RS10230	0.90	-0.6
2,287,569	-		LRK53_RS10230	0.90	-0.7
2,287,569	-		LRK53_RS10230	0.90	-0.6
2,287,610	-				+0.3
2,287,727	+				-1.1
2,287,749	-				-1.3
2,287,790	-				+0.0
2,287,856	-				-0.0
2,287,890	-				-1.5
2,287,959	+				-1.1
2,287,959	+				-2.1
2,287,959	+				+0.7
2,287,959	+				+0.5
2,287,959	+				-0.9
2,287,959	+				-0.3
2,287,959	+				-2.4
2,287,959	+				-0.4
2,288,263	+		LRK53_RS10235	0.40	-1.4
2,288,263	+		LRK53_RS10235	0.40	-0.1
2,288,263	+		LRK53_RS10235	0.40	-0.9
2,288,263	+		LRK53_RS10235	0.40	+0.2
2,288,264	-		LRK53_RS10235	0.40	+0.5
2,288,264	-		LRK53_RS10235	0.40	+0.1
2,288,264	-		LRK53_RS10235	0.40	-1.1
2,288,264	-		LRK53_RS10235	0.40	-1.2
2,288,264	-		LRK53_RS10235	0.40	-0.4
2,288,264	-		LRK53_RS10235	0.40	-0.3
2,288,264	-		LRK53_RS10235	0.40	-0.6
2,288,264	-		LRK53_RS10235	0.40	-1.8
2,288,264	-		LRK53_RS10235	0.40	-0.9
2,288,264	-		LRK53_RS10235	0.40	-3.3
2,288,264	-		LRK53_RS10235	0.40	-0.3
2,288,360	+		LRK53_RS10235	0.50	-0.2