Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09470

Experiment: planktonic; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Aluminum chloride 1mM
2,124,349	+		LRK53_RS09465	0.37	-1.3
2,124,349	+		LRK53_RS09465	0.37	-0.2
2,124,349	+		LRK53_RS09465	0.37	+0.3
2,124,349	+		LRK53_RS09465	0.37	-2.3
2,124,349	+		LRK53_RS09465	0.37	-1.2
2,124,350	-		LRK53_RS09465	0.37	-0.9
2,124,350	-		LRK53_RS09465	0.37	-0.4
2,124,350	-		LRK53_RS09465	0.37	-0.5
2,124,355	+		LRK53_RS09465	0.37	+0.6
2,124,356	-		LRK53_RS09465	0.38	-0.6
2,124,356	-		LRK53_RS09465	0.38	-2.2
2,124,493	+		LRK53_RS09465	0.49	-1.2
2,124,493	+		LRK53_RS09465	0.49	-0.9
2,124,562	+		LRK53_RS09465	0.55	-2.0
2,124,562	+		LRK53_RS09465	0.55	-2.9
2,124,562	+		LRK53_RS09465	0.55	-1.2
2,124,562	+		LRK53_RS09465	0.55	-0.0
2,124,562	+		LRK53_RS09465	0.55	-0.9
2,124,562	+		LRK53_RS09465	0.55	+1.0
2,124,562	+		LRK53_RS09465	0.55	-0.3
2,124,562	+		LRK53_RS09465	0.55	-0.2
2,124,562	+		LRK53_RS09465	0.55	-0.1
2,124,563	-		LRK53_RS09465	0.56	-1.2
2,124,563	-		LRK53_RS09465	0.56	-0.1
2,124,563	-		LRK53_RS09465	0.56	-0.7
2,124,563	-		LRK53_RS09465	0.56	-1.6
2,124,563	-		LRK53_RS09465	0.56	-0.4
2,124,563	-		LRK53_RS09465	0.56	+1.0
2,124,563	-		LRK53_RS09465	0.56	-0.4
2,124,563	-		LRK53_RS09465	0.56	+0.4
2,124,563	-		LRK53_RS09465	0.56	+1.4
2,124,563	-		LRK53_RS09465	0.56	-1.8
2,124,563	-		LRK53_RS09465	0.56	-0.6
2,124,733	+		LRK53_RS09465	0.70	+1.2
2,124,733	+		LRK53_RS09465	0.70	+0.0
2,124,733	+		LRK53_RS09465	0.70	+0.2
2,124,734	-		LRK53_RS09465	0.71	-0.6
2,124,734	-		LRK53_RS09465	0.71	+1.4
2,124,883	+		LRK53_RS09465	0.84	-0.6
2,124,883	+		LRK53_RS09465	0.84	-0.6
2,124,884	-		LRK53_RS09465	0.84	+0.6
2,124,884	-		LRK53_RS09465	0.84	-1.6
2,124,898	+		LRK53_RS09465	0.85	+0.3
2,124,898	+		LRK53_RS09465	0.85	-1.0
2,124,898	+		LRK53_RS09465	0.85	+0.3
2,125,024	+				-1.0
2,125,024	+				+1.2
2,125,024	+				-0.2
2,125,025	-				-2.1
2,125,025	-				-2.3
2,125,025	-				-0.2
2,125,025	-				-1.7
2,125,025	-				-1.3
2,125,025	-				-0.4
2,125,025	-				+1.3
2,125,025	-				-0.9
2,125,025	-				-2.9
2,125,048	+				-1.7
2,125,048	+				-0.6
2,125,048	+				+2.0
2,125,048	+				-1.2
2,125,048	+				-0.9
2,125,049	-				-1.5
2,125,049	-				-0.9
2,125,049	-				+0.4
2,125,049	-				-1.2
2,125,049	-				-0.0
2,125,049	-				-0.6
2,125,049	-				+0.6
2,125,049	-				-1.8
2,125,049	-				-2.0
2,125,049	-				-0.8
2,125,049	-				+1.6
2,125,049	-				-0.1
2,125,049	-				+0.4
2,125,049	-				-0.9
2,125,049	-				-0.6
2,125,049	-				-1.7
2,125,069	+				-0.3
2,125,122	+				-3.3
2,125,304	+		LRK53_RS09470	0.13	-0.7
2,125,304	+		LRK53_RS09470	0.13	-0.6
2,125,304	+		LRK53_RS09470	0.13	-0.8
2,125,304	+		LRK53_RS09470	0.13	-0.4
2,125,305	-		LRK53_RS09470	0.13	-2.1
2,125,305	-		LRK53_RS09470	0.13	-0.7
2,125,305	-		LRK53_RS09470	0.13	-0.7
2,125,305	-		LRK53_RS09470	0.13	+0.3
2,125,305	-		LRK53_RS09470	0.13	-1.0
2,125,305	-		LRK53_RS09470	0.13	-2.1
2,125,305	-		LRK53_RS09470	0.13	-0.7
2,125,305	-		LRK53_RS09470	0.13	-0.3
2,125,305	-		LRK53_RS09470	0.13	-0.5
2,125,305	-		LRK53_RS09470	0.13	-1.6
2,125,305	-		LRK53_RS09470	0.13	-0.9
2,125,305	-		LRK53_RS09470	0.13	-0.7
2,125,400	+		LRK53_RS09470	0.27	-0.9
2,125,400	+		LRK53_RS09470	0.27	-1.3
2,125,401	-		LRK53_RS09470	0.27	-1.3
2,125,703	-		LRK53_RS09470	0.71	-0.9
2,125,840	+				-1.1
2,126,041	-				-0.9
2,126,041	-				-2.0
2,126,041	-				-0.7
2,126,064	+				-0.9
2,126,065	-				-3.4
2,126,065	-				+0.6
2,126,065	-				-0.3
2,126,065	-				-0.9
2,126,065	-				-0.8
2,126,065	-				-0.7
2,126,065	-				-2.1
2,126,065	-				+0.0
2,126,065	-				+0.3
2,126,065	-				-0.4
2,126,065	-				+0.2
2,126,065	-				-1.1
2,126,065	-				-2.6
2,126,065	-				+0.6
2,126,065	-				-0.7
2,126,065	-				+0.5
2,126,065	-				-0.2
2,126,065	-				-1.1
2,126,065	-				-2.3
2,126,157	+				+1.5
2,126,157	+				-1.8
2,126,158	-				-0.8
2,126,256	+				+0.0
2,126,256	+				-1.2
2,126,256	+				-1.3
2,126,256	+				+0.9
2,126,256	+				+0.3
2,126,256	+				+0.3
2,126,256	+				+0.2
2,126,256	+				+0.3
2,126,256	+				+1.2
2,126,257	-				-0.9
2,126,257	-				-0.0
2,126,257	-				-0.2
2,126,257	-				-1.1
2,126,257	-				-0.6
2,126,257	-				+1.4
2,126,257	-				+0.2
2,126,257	-				-0.8
2,126,257	-				-1.0
2,126,257	-				-0.2
2,126,257	-				-0.6
2,126,257	-				-0.4
2,126,257	-				+0.2
2,126,257	-				+0.0
2,126,292	+				-0.6
2,126,292	+				+1.0
2,126,292	+				+0.6
2,126,292	+				-1.1
2,126,292	+				-0.0
2,126,292	+				-2.0
2,126,292	+				+1.6
2,126,292	+				-0.4
2,126,292	+				-0.3
2,126,292	+				-0.4
2,126,292	+				+0.7
2,126,292	+				-0.6
2,126,292	+				-0.0
2,126,293	-				-2.9
2,126,293	-				+0.9
2,126,293	-				-0.2
2,126,293	-				-1.2
2,126,293	-				-0.4
2,126,293	-				-1.3
2,126,293	-				+1.8
2,126,293	-				-0.1
2,126,307	+				-1.9
2,126,307	+				-0.2
2,126,307	+				-0.8
2,126,307	+				-0.2
2,126,307	+				+0.4
2,126,307	+				+0.2
2,126,307	+				-0.4
2,126,307	+				-1.9
2,126,307	+				-1.1
2,126,307	+				+1.3
2,126,308	-				-0.8
2,126,308	-				-0.4
2,126,308	-				-0.2
2,126,308	-				+0.9
2,126,568	+		LRK53_RS09475	0.26	+0.2
2,126,664	+		LRK53_RS09475	0.33	-0.7
2,126,664	+		LRK53_RS09475	0.33	+2.4
2,126,665	-		LRK53_RS09475	0.33	-1.2
2,126,665	-		LRK53_RS09475	0.33	-0.8
2,126,665	-		LRK53_RS09475	0.33	+1.0
2,126,665	-		LRK53_RS09475	0.33	-0.6
2,126,823	+		LRK53_RS09475	0.44	-1.1
2,126,823	+		LRK53_RS09475	0.44	-0.0
2,126,823	+		LRK53_RS09475	0.44	-1.9
2,126,823	+		LRK53_RS09475	0.44	-0.7
2,126,823	+		LRK53_RS09475	0.44	-0.0
2,126,824	-		LRK53_RS09475	0.44	-1.1
2,126,824	-		LRK53_RS09475	0.44	+0.4
2,126,824	-		LRK53_RS09475	0.44	+1.2