Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04156

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
21,555	+		MIT1002_04155	0.62	-1.4
21,562	-		MIT1002_04155	0.62	+0.8
21,563	-		MIT1002_04155	0.62	+1.1
21,598	+		MIT1002_04155	0.64	+0.7
21,599	-		MIT1002_04155	0.65	+0.4
21,606	-		MIT1002_04155	0.65	-2.3
21,606	-		MIT1002_04155	0.65	-0.7
21,606	-		MIT1002_04155	0.65	-0.1
21,606	-		MIT1002_04155	0.65	+2.6
21,770	-		MIT1002_04155	0.75	+1.1
21,774	+		MIT1002_04155	0.75	-3.4
21,774	+		MIT1002_04155	0.75	+0.4
21,837	+		MIT1002_04155	0.79	-0.4
21,855	+		MIT1002_04155	0.80	+0.4
21,863	-		MIT1002_04155	0.80	-0.6
21,863	-		MIT1002_04155	0.80	-1.2
21,868	-		MIT1002_04155	0.81	-2.7
21,888	+		MIT1002_04155	0.82	-0.5
22,025	-		MIT1002_04155	0.90	-1.1
22,031	+				-0.0
22,078	+				-1.2
22,078	+				+0.1
22,269	+				-0.3
22,323	+				-1.6
22,323	+				-1.2
22,331	-				+0.5
22,331	-				+0.4
22,331	-				-2.4
22,344	+				-0.7
22,352	-				-1.3
22,362	-				-0.9
22,485	+				-1.7
22,526	-				-1.5
22,558	+				+0.0
22,582	+				-0.0
22,688	+				-0.7
22,704	-				+1.0
22,744	+				-1.7
22,793	+		MIT1002_04156	0.11	-0.2
22,797	-		MIT1002_04156	0.11	-1.4
22,867	-		MIT1002_04156	0.14	+0.2
22,943	+		MIT1002_04156	0.17	+0.0
22,947	+		MIT1002_04156	0.17	-1.2
22,965	-		MIT1002_04156	0.18	-0.6
22,974	+		MIT1002_04156	0.18	+0.6
22,974	+		MIT1002_04156	0.18	+1.1
22,974	+		MIT1002_04156	0.18	+1.5
22,974	+		MIT1002_04156	0.18	-0.4
22,974	+		MIT1002_04156	0.18	+0.6
22,974	+		MIT1002_04156	0.18	+2.6
22,982	-		MIT1002_04156	0.18	-2.4
22,982	-		MIT1002_04156	0.18	+0.3
22,982	-		MIT1002_04156	0.18	-1.4
22,982	-		MIT1002_04156	0.18	-0.0
22,982	-		MIT1002_04156	0.18	+1.8
22,982	-		MIT1002_04156	0.18	-0.2
22,998	-		MIT1002_04156	0.19	-1.9
23,042	+		MIT1002_04156	0.21	-0.1
23,050	-		MIT1002_04156	0.21	-0.2
23,126	+		MIT1002_04156	0.24	+0.8
23,130	+		MIT1002_04156	0.24	-0.4
23,190	-		MIT1002_04156	0.27	-0.7
23,190	-		MIT1002_04156	0.27	+0.4
23,265	+		MIT1002_04156	0.30	+0.6
23,266	-		MIT1002_04156	0.30	-2.7
23,363	-		MIT1002_04156	0.34	+1.5
23,389	+		MIT1002_04156	0.35	-0.0
23,402	+		MIT1002_04156	0.35	-0.5
23,402	-		MIT1002_04156	0.35	+0.2
23,410	-		MIT1002_04156	0.36	+0.2
23,410	-		MIT1002_04156	0.36	+0.5
23,468	+		MIT1002_04156	0.38	+0.7
23,520	+		MIT1002_04156	0.40	+0.3
23,520	+		MIT1002_04156	0.40	+1.0
23,580	-		MIT1002_04156	0.43	-1.6
23,591	-		MIT1002_04156	0.43	-0.9
23,668	+		MIT1002_04156	0.46	+0.8
23,762	+		MIT1002_04156	0.50	-1.0
23,801	-		MIT1002_04156	0.51	+0.7
23,809	+		MIT1002_04156	0.52	-2.6
23,812	+		MIT1002_04156	0.52	-0.5
23,820	-		MIT1002_04156	0.52	+0.3
23,890	-		MIT1002_04156	0.55	-0.6
23,900	-		MIT1002_04156	0.55	+0.3
23,918	-		MIT1002_04156	0.56	+2.1
23,944	-		MIT1002_04156	0.57	+0.8
24,198	+		MIT1002_04156	0.67	-0.4
24,235	-		MIT1002_04156	0.69	-0.7
24,265	+		MIT1002_04156	0.70	-1.0
24,266	+		MIT1002_04156	0.70	+0.7
24,274	+		MIT1002_04156	0.71	-2.3
24,282	-		MIT1002_04156	0.71	+2.1
24,322	-		MIT1002_04156	0.72	+0.9
24,355	-		MIT1002_04156	0.74	+1.1
24,409	+		MIT1002_04156	0.76	-0.1
24,434	+		MIT1002_04156	0.77	-3.7
24,442	-		MIT1002_04156	0.77	+1.1
24,442	-		MIT1002_04156	0.77	+0.8
24,455	+		MIT1002_04156	0.78	+0.8
24,509	-		MIT1002_04156	0.80	-0.2
24,584	-		MIT1002_04156	0.83	+0.2
24,620	-		MIT1002_04156	0.85	+3.1
24,634	-		MIT1002_04156	0.85	-0.8
24,659	+		MIT1002_04156	0.86	+0.3
24,659	+		MIT1002_04156	0.86	-0.4
24,659	+		MIT1002_04156	0.86	+0.3
24,659	+		MIT1002_04156	0.86	-0.8
24,667	-		MIT1002_04156	0.86	+0.4
24,667	-		MIT1002_04156	0.86	+0.0
24,768	+				-0.9
24,783	-				-1.7
24,783	-				-0.7
24,788	-				-0.9
24,788	-				-0.9
24,889	+				+1.9
24,902	-				+1.1
24,912	-				+0.1
25,041	-				-0.5
25,079	-				-2.7
25,090	-				-0.9
25,123	-				-0.2
25,161	+				+1.4
25,179	-				+0.6
25,247	+				+1.4
25,288	+				+0.8
25,312	-				-0.2
25,316	-				-2.2
25,327	+				-0.6
25,354	-				+1.2
25,575	+		MIT1002_04157	0.47	+1.5
25,577	-		MIT1002_04157	0.47	-1.1
25,601	+		MIT1002_04157	0.53	-0.8
25,601	+		MIT1002_04157	0.53	-1.7
25,609	-		MIT1002_04157	0.54	-1.6
25,706	-		MIT1002_04157	0.76	+1.0
25,874	+				-1.0
25,874	+				+0.2
25,882	-				+0.5
25,882	-				-1.5
25,882	-				+0.1
25,903	+		MIT1002_04158	0.11	+1.6
25,941	-		MIT1002_04158	0.15	+0.2
25,941	-		MIT1002_04158	0.15	-1.4
25,985	+		MIT1002_04158	0.19	-0.2
25,993	-		MIT1002_04158	0.20	-0.9