Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04103

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,604,927	+		MIT1002_04102	0.41	-1.9
4,604,927	+		MIT1002_04102	0.41	+2.3
4,604,966	-		MIT1002_04102	0.43	-3.2
4,604,988	+		MIT1002_04102	0.44	+0.0
4,604,996	-		MIT1002_04102	0.45	-1.0
4,604,996	-		MIT1002_04102	0.45	+0.0
4,604,996	-		MIT1002_04102	0.45	-0.0
4,604,996	-		MIT1002_04102	0.45	-0.8
4,604,996	-		MIT1002_04102	0.45	-2.0
4,604,996	-		MIT1002_04102	0.45	+0.6
4,605,074	+		MIT1002_04102	0.50	-3.0
4,605,107	-		MIT1002_04102	0.52	-0.4
4,605,107	-		MIT1002_04102	0.52	+0.8
4,605,109	-		MIT1002_04102	0.52	-2.0
4,605,207	+		MIT1002_04102	0.58	+1.4
4,605,215	-		MIT1002_04102	0.59	+0.8
4,605,261	-		MIT1002_04102	0.61	-2.3
4,605,431	+		MIT1002_04102	0.72	-1.4
4,605,555	+		MIT1002_04102	0.80	+0.6
4,605,571	+		MIT1002_04102	0.81	-0.6
4,605,571	+		MIT1002_04102	0.81	-0.4
4,605,571	+		MIT1002_04102	0.81	-0.1
4,605,579	-		MIT1002_04102	0.81	+1.6
4,605,589	-		MIT1002_04102	0.82	-0.6
4,605,601	+		MIT1002_04102	0.83	+0.5
4,605,601	+		MIT1002_04102	0.83	-0.6
4,605,609	-		MIT1002_04102	0.83	+0.4
4,605,642	+		MIT1002_04102	0.85	-1.7
4,605,728	+				-1.9
4,605,782	+				+1.6
4,605,782	+				-0.1
4,605,782	+				-0.5
4,605,782	+				-0.8
4,605,782	+				+0.4
4,605,782	+				+1.0
4,605,782	+				+0.6
4,605,790	-				-0.4
4,605,790	-				+0.2
4,605,790	-				+0.1
4,605,790	-				-1.4
4,605,790	-				-0.8
4,605,790	-				-2.9
4,605,790	-				-2.2
4,605,790	-				-0.3
4,605,792	+				+0.2
4,605,800	-				+1.8
4,605,836	+				+0.8
4,605,852	-				-1.1
4,605,875	+				+0.8
4,605,936	+				-5.5
4,605,974	+				-1.2
4,606,001	+				-2.6
4,606,019	-				-2.7
4,606,025	-				-3.0
4,606,107	+		MIT1002_04103	0.18	-2.5
4,606,115	-		MIT1002_04103	0.19	-3.7
4,606,122	+		MIT1002_04103	0.20	-2.9
4,606,170	+		MIT1002_04103	0.24	-3.0
4,606,196	+		MIT1002_04103	0.27	-4.8
4,606,214	+		MIT1002_04103	0.29	-2.6
4,606,222	-		MIT1002_04103	0.30	-4.5
4,606,323	+		MIT1002_04103	0.40	-2.3
4,606,374	-		MIT1002_04103	0.45	-0.7
4,606,384	+		MIT1002_04103	0.46	-2.3
4,606,478	-		MIT1002_04103	0.55	-2.8
4,606,499	+		MIT1002_04103	0.57	-4.1
4,606,499	+		MIT1002_04103	0.57	-2.3
4,606,539	-		MIT1002_04103	0.61	-1.4
4,606,541	+		MIT1002_04103	0.61	-2.5
4,606,549	-		MIT1002_04103	0.62	-0.7
4,606,643	+		MIT1002_04103	0.72	-1.6
4,606,643	+		MIT1002_04103	0.72	-1.8
4,606,643	+		MIT1002_04103	0.72	-3.6
4,606,643	+		MIT1002_04103	0.72	-2.0
4,606,643	+		MIT1002_04103	0.72	-1.1
4,606,643	+		MIT1002_04103	0.72	-3.0
4,606,643	+		MIT1002_04103	0.72	-1.5
4,606,651	-		MIT1002_04103	0.72	-1.5
4,606,651	-		MIT1002_04103	0.72	-1.5
4,606,651	-		MIT1002_04103	0.72	+0.6
4,606,651	-		MIT1002_04103	0.72	-0.0
4,606,651	-		MIT1002_04103	0.72	-3.3
4,606,651	-		MIT1002_04103	0.72	+0.8
4,606,651	-		MIT1002_04103	0.72	+0.8
4,606,651	-		MIT1002_04103	0.72	-3.1
4,606,651	-		MIT1002_04103	0.72	-0.4
4,606,651	-		MIT1002_04103	0.72	-1.5
4,606,679	+		MIT1002_04103	0.75	-1.7
4,606,679	+		MIT1002_04103	0.75	-1.3
4,606,827	+				-1.6
4,606,835	-				-0.9
4,606,852	-				-1.6
4,606,855	+				-3.2
4,606,855	+				-4.7
4,606,873	-				-1.5
4,606,895	+				+1.2
4,606,895	+				-3.3
4,606,903	-				-2.3
4,606,903	-				-2.0
4,606,916	+				-1.8
4,606,923	+				-0.3
4,607,024	-				-0.6
4,607,042	+				-0.6
4,607,042	+				+1.2
4,607,082	+				-1.5
4,607,119	+				+0.8
4,607,229	+		MIT1002_04104	0.14	-2.8
4,607,229	+		MIT1002_04104	0.14	-0.2
4,607,292	+		MIT1002_04104	0.19	+0.1
4,607,300	-		MIT1002_04104	0.20	+3.5
4,607,300	-		MIT1002_04104	0.20	+1.7
4,607,332	-		MIT1002_04104	0.23	-1.0
4,607,425	+		MIT1002_04104	0.31	+0.2
4,607,433	-		MIT1002_04104	0.31	-1.4
4,607,546	-		MIT1002_04104	0.41	+3.2
4,607,582	+		MIT1002_04104	0.44	-1.5
4,607,604	+		MIT1002_04104	0.46	-0.4
4,607,604	+		MIT1002_04104	0.46	-1.2
4,607,604	+		MIT1002_04104	0.46	+1.1
4,607,604	+		MIT1002_04104	0.46	+0.6
4,607,604	+		MIT1002_04104	0.46	+1.8
4,607,604	+		MIT1002_04104	0.46	-0.5
4,607,604	+		MIT1002_04104	0.46	-0.2
4,607,604	-		MIT1002_04104	0.46	-0.2
4,607,607	-		MIT1002_04104	0.46	-1.8
4,607,612	-		MIT1002_04104	0.46	-0.1
4,607,612	-		MIT1002_04104	0.46	-0.9
4,607,612	-		MIT1002_04104	0.46	-3.3
4,607,612	-		MIT1002_04104	0.46	+1.2
4,607,612	-		MIT1002_04104	0.46	-0.1
4,607,612	-		MIT1002_04104	0.46	+0.5
4,607,612	-		MIT1002_04104	0.46	+0.2
4,607,612	-		MIT1002_04104	0.46	-0.2
4,607,612	-		MIT1002_04104	0.46	-0.8
4,607,612	-		MIT1002_04104	0.46	-1.9
4,607,612	-		MIT1002_04104	0.46	-1.0
4,607,612	-		MIT1002_04104	0.46	+0.7
4,607,612	-		MIT1002_04104	0.46	-0.3
4,607,612	-		MIT1002_04104	0.46	+0.5
4,607,612	-		MIT1002_04104	0.46	+2.4
4,607,612	-		MIT1002_04104	0.46	+1.2
4,607,612	-		MIT1002_04104	0.46	+1.2
4,607,612	-		MIT1002_04104	0.46	+0.5
4,607,646	+		MIT1002_04104	0.49	-0.2
4,607,655	-		MIT1002_04104	0.50	+0.7
4,607,688	+		MIT1002_04104	0.53	+0.6
4,607,691	-		MIT1002_04104	0.53	-0.3
4,607,696	-		MIT1002_04104	0.54	+0.7
4,607,701	-		MIT1002_04104	0.54	-1.2
4,607,771	+		MIT1002_04104	0.60	+0.9
4,607,798	+		MIT1002_04104	0.62	-0.4
4,607,812	+		MIT1002_04104	0.64	+0.2
4,607,835	-		MIT1002_04104	0.66	-0.3
4,607,842	-		MIT1002_04104	0.66	+0.2