Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04056

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,555,172	+		MIT1002_04054	0.63	+1.2
4,555,172	+		MIT1002_04054	0.63	-2.0
4,555,244	-		MIT1002_04054	0.70	+1.2
4,555,259	-		MIT1002_04054	0.71	-1.2
4,555,410	-		MIT1002_04054	0.86	+2.6
4,555,410	-		MIT1002_04054	0.86	-2.8
4,555,410	-		MIT1002_04054	0.86	+3.0
4,555,448	-				+0.2
4,555,450	+				-1.1
4,555,767	-		MIT1002_04055	0.47	-0.0
4,555,767	-		MIT1002_04055	0.47	-0.7
4,555,829	+		MIT1002_04055	0.62	-0.6
4,555,829	+		MIT1002_04055	0.62	-1.7
4,555,829	+		MIT1002_04055	0.62	+1.8
4,555,837	-		MIT1002_04055	0.63	-1.7
4,555,887	+		MIT1002_04055	0.75	+2.5
4,555,895	-		MIT1002_04055	0.77	+0.7
4,555,975	+				+0.3
4,555,975	+				-0.3
4,555,981	+				-2.5
4,555,983	-				+0.2
4,555,983	-				-0.0
4,556,024	+				+1.2
4,556,083	+				-0.0
4,556,176	+				-4.2
4,556,176	+				-3.2
4,556,176	+				-1.9
4,556,176	+				-3.6
4,556,184	-				-2.0
4,556,184	-				-2.1
4,556,184	-				-1.4
4,556,235	-		MIT1002_04056	0.10	-2.2
4,556,250	+		MIT1002_04056	0.12	-0.3
4,556,291	+		MIT1002_04056	0.15	+0.4
4,556,299	-		MIT1002_04056	0.16	+0.4
4,556,351	+		MIT1002_04056	0.21	-2.4
4,556,396	-		MIT1002_04056	0.25	-1.9
4,556,424	+		MIT1002_04056	0.27	-0.0
4,556,451	-		MIT1002_04056	0.30	-2.5
4,556,459	+		MIT1002_04056	0.31	-0.8
4,556,467	-		MIT1002_04056	0.31	-2.8
4,556,499	-		MIT1002_04056	0.34	-3.0
4,556,514	-		MIT1002_04056	0.36	-0.7
4,556,609	+		MIT1002_04056	0.44	-1.7
4,556,610	+		MIT1002_04056	0.44	-2.2
4,556,617	-		MIT1002_04056	0.45	+0.8
4,556,629	+		MIT1002_04056	0.46	+1.2
4,556,629	+		MIT1002_04056	0.46	-3.8
4,556,637	-		MIT1002_04056	0.47	-3.3
4,556,709	-		MIT1002_04056	0.53	+0.6
4,556,806	-		MIT1002_04056	0.62	-4.3
4,556,808	+		MIT1002_04056	0.62	-5.5
4,556,844	-		MIT1002_04056	0.66	-3.8
4,556,844	-		MIT1002_04056	0.66	-3.6
4,556,902	+		MIT1002_04056	0.71	-4.3
4,557,022	+		MIT1002_04056	0.82	-3.3
4,557,039	-		MIT1002_04056	0.83	-1.1
4,557,040	-		MIT1002_04056	0.83	-1.6
4,557,194	-				-3.0
4,557,262	-				-2.2
4,557,370	+				+1.5
4,557,370	+				+0.2
4,557,393	-				-0.2
4,557,423	+				+0.9
4,557,423	+				-0.2
4,557,576	-				+0.2
4,557,576	-				+0.0
4,557,576	-				-0.1
4,557,581	+				+0.8
4,557,665	-		MIT1002_04057	0.10	+0.4
4,557,707	+		MIT1002_04057	0.12	-0.8
4,557,707	+		MIT1002_04057	0.12	+3.0
4,557,708	-		MIT1002_04057	0.12	-0.2
4,557,713	-		MIT1002_04057	0.12	-0.7
4,557,752	+		MIT1002_04057	0.14	-0.2
4,557,766	+		MIT1002_04057	0.14	+1.1
4,557,852	-		MIT1002_04057	0.18	+0.4
4,557,892	+		MIT1002_04057	0.19	+1.9
4,557,900	-		MIT1002_04057	0.20	+0.9
4,557,974	-		MIT1002_04057	0.23	+1.0
4,557,991	-		MIT1002_04057	0.23	-1.5
4,558,011	-		MIT1002_04057	0.24	-0.4
4,558,052	+		MIT1002_04057	0.26	+0.6
4,558,094	+		MIT1002_04057	0.28	-2.0
4,558,094	+		MIT1002_04057	0.28	+0.4
4,558,122	-		MIT1002_04057	0.29	+0.2
4,558,127	+		MIT1002_04057	0.29	+1.8
4,558,159	+		MIT1002_04057	0.30	-0.7