Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04047

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,542,677	-		MIT1002_04046	0.34	+0.5
4,542,677	-		MIT1002_04046	0.34	+2.1
4,542,710	-		MIT1002_04046	0.36	-1.1
4,542,768	+		MIT1002_04046	0.41	+0.1
4,542,797	+		MIT1002_04046	0.43	+0.2
4,542,797	+		MIT1002_04046	0.43	-0.3
4,542,805	+		MIT1002_04046	0.44	+0.5
4,542,805	-		MIT1002_04046	0.44	+2.0
4,542,812	-		MIT1002_04046	0.44	-2.2
4,542,812	-		MIT1002_04046	0.44	+0.8
4,542,812	-		MIT1002_04046	0.44	+1.5
4,542,812	-		MIT1002_04046	0.44	-2.2
4,542,813	-		MIT1002_04046	0.44	+0.1
4,542,818	+		MIT1002_04046	0.45	-0.5
4,542,894	-		MIT1002_04046	0.51	-0.3
4,542,978	+		MIT1002_04046	0.58	-0.2
4,542,986	-		MIT1002_04046	0.58	-0.4
4,543,079	+		MIT1002_04046	0.66	-2.3
4,543,087	-		MIT1002_04046	0.66	+1.3
4,543,087	-		MIT1002_04046	0.66	+2.0
4,543,127	+		MIT1002_04046	0.70	-2.0
4,543,135	-		MIT1002_04046	0.70	-0.2
4,543,215	-		MIT1002_04046	0.77	-1.1
4,543,242	+		MIT1002_04046	0.79	+0.0
4,543,339	-		MIT1002_04046	0.87	+0.6
4,543,376	+		MIT1002_04046	0.90	-0.3
4,543,411	+				+0.4
4,543,463	+				-0.3
4,543,463	-				+0.2
4,543,473	+				-1.8
4,543,481	-				-1.5
4,543,574	-				-1.3
4,543,803	+				-1.2
4,543,860	+		MIT1002_04047	0.11	+2.0
4,543,898	+		MIT1002_04047	0.13	-0.2
4,543,911	+		MIT1002_04047	0.13	+2.3
4,543,916	+		MIT1002_04047	0.14	+0.8
4,543,924	-		MIT1002_04047	0.14	-1.7
4,544,057	-		MIT1002_04047	0.21	-0.6
4,544,137	-		MIT1002_04047	0.25	+0.6
4,544,147	+		MIT1002_04047	0.25	-0.0
4,544,147	-		MIT1002_04047	0.25	-0.3
4,544,160	-		MIT1002_04047	0.26	-2.2
4,544,201	-		MIT1002_04047	0.28	-0.0
4,544,221	+		MIT1002_04047	0.29	-0.7
4,544,228	+		MIT1002_04047	0.29	+1.0
4,544,234	-		MIT1002_04047	0.30	-0.0
4,544,236	-		MIT1002_04047	0.30	-0.2
4,544,236	-		MIT1002_04047	0.30	+0.9
4,544,250	+		MIT1002_04047	0.30	+0.2
4,544,250	-		MIT1002_04047	0.30	-1.2
4,544,262	+		MIT1002_04047	0.31	+0.5
4,544,272	-		MIT1002_04047	0.31	-0.2
4,544,274	+		MIT1002_04047	0.32	+0.7
4,544,280	-		MIT1002_04047	0.32	-1.3
4,544,282	-		MIT1002_04047	0.32	+0.3
4,544,301	+		MIT1002_04047	0.33	-1.5
4,544,309	-		MIT1002_04047	0.33	-0.4
4,544,309	-		MIT1002_04047	0.33	-0.3
4,544,332	+		MIT1002_04047	0.34	-0.4
4,544,340	-		MIT1002_04047	0.35	-1.2
4,544,390	+		MIT1002_04047	0.37	+1.6
4,544,398	-		MIT1002_04047	0.38	+0.4
4,544,449	-		MIT1002_04047	0.40	-0.0
4,544,544	+		MIT1002_04047	0.45	-0.3
4,544,552	-		MIT1002_04047	0.45	+0.6
4,544,552	-		MIT1002_04047	0.45	-1.6
4,544,594	+		MIT1002_04047	0.48	-0.5
4,544,620	+		MIT1002_04047	0.49	-1.5
4,544,659	+		MIT1002_04047	0.51	-0.5
4,544,727	-		MIT1002_04047	0.54	+0.2
4,544,730	+		MIT1002_04047	0.54	-0.8
4,544,737	+		MIT1002_04047	0.55	+0.6
4,544,744	-		MIT1002_04047	0.55	-0.4
4,544,745	-		MIT1002_04047	0.55	+0.3
4,544,745	-		MIT1002_04047	0.55	-0.9
4,544,746	-		MIT1002_04047	0.55	-0.2
4,544,752	-		MIT1002_04047	0.56	-1.3
4,544,754	+		MIT1002_04047	0.56	+0.5
4,544,754	+		MIT1002_04047	0.56	+0.9
4,544,754	+		MIT1002_04047	0.56	+0.0
4,544,778	+		MIT1002_04047	0.57	-1.3
4,544,785	+		MIT1002_04047	0.57	+0.3
4,544,785	+		MIT1002_04047	0.57	+0.6
4,544,785	+		MIT1002_04047	0.57	-0.1
4,544,785	+		MIT1002_04047	0.57	+0.8
4,544,785	+		MIT1002_04047	0.57	-0.9
4,544,786	-		MIT1002_04047	0.57	+0.6
4,544,792	+		MIT1002_04047	0.58	+0.1
4,544,793	+		MIT1002_04047	0.58	-0.8
4,544,793	-		MIT1002_04047	0.58	-0.2
4,544,793	-		MIT1002_04047	0.58	-0.6
4,544,793	-		MIT1002_04047	0.58	-0.4
4,544,793	-		MIT1002_04047	0.58	+0.3
4,544,793	-		MIT1002_04047	0.58	+0.8
4,544,793	-		MIT1002_04047	0.58	-1.2
4,544,793	-		MIT1002_04047	0.58	+3.2
4,544,793	-		MIT1002_04047	0.58	+2.7
4,544,800	-		MIT1002_04047	0.58	-0.2
4,544,875	-		MIT1002_04047	0.62	-1.1
4,544,875	-		MIT1002_04047	0.62	+0.3
4,544,955	-		MIT1002_04047	0.66	-0.7
4,544,995	-		MIT1002_04047	0.68	+1.6
4,545,129	-		MIT1002_04047	0.74	-1.3
4,545,151	-		MIT1002_04047	0.76	-0.7
4,545,189	+		MIT1002_04047	0.77	+0.6
4,545,201	+		MIT1002_04047	0.78	+1.2
4,545,229	-		MIT1002_04047	0.79	-0.8
4,545,233	+		MIT1002_04047	0.80	-0.4
4,545,262	+		MIT1002_04047	0.81	+1.3
4,545,317	-		MIT1002_04047	0.84	-0.2
4,545,548	+				-1.8
4,545,551	-				+0.7
4,545,587	-				+0.0
4,545,701	+				+1.4
4,545,707	-				-0.4
4,545,709	+				+2.2
4,545,717	-				-0.5
4,545,717	-				+0.8
4,545,728	-				+0.8
4,545,759	+				-0.8
4,545,764	-				+1.3
4,545,764	-				-0.8
4,545,778	-				-0.7
4,545,778	-				-1.8
4,545,909	+				+0.6
4,545,909	+				+2.9
4,545,909	+				+1.1
4,545,950	-				+0.5
4,546,224	-				+1.4
4,546,236	-				-0.6
4,546,241	-				+0.7
4,546,367	-				-0.0
4,546,367	-				+0.9
4,546,527	+		MIT1002_04048	0.15	-0.2
4,546,549	+		MIT1002_04048	0.16	+0.0
4,546,554	+		MIT1002_04048	0.16	+3.0
4,546,589	+		MIT1002_04048	0.18	+0.4
4,546,589	+		MIT1002_04048	0.18	+0.4
4,546,589	+		MIT1002_04048	0.18	+0.3
4,546,589	+		MIT1002_04048	0.18	+1.2
4,546,589	+		MIT1002_04048	0.18	+0.6
4,546,589	+		MIT1002_04048	0.18	-1.2
4,546,597	-		MIT1002_04048	0.19	-0.2
4,546,597	-		MIT1002_04048	0.19	+0.8
4,546,597	-		MIT1002_04048	0.19	+1.2
4,546,615	-		MIT1002_04048	0.20	+0.1