Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04040

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,533,069	+				-1.6
4,533,127	+				+0.3
4,533,203	-				+0.5
4,533,301	-				-0.6
4,533,306	-				-2.1
4,533,346	+				-2.9
4,533,354	-				+0.0
4,533,365	+				-0.6
4,533,396	+				-0.9
4,533,404	-				+1.2
4,533,411	+				-3.7
4,533,451	-				-1.2
4,533,495	-				-1.2
4,533,541	-				-3.5
4,533,557	-		MIT1002_04040	0.10	-1.2
4,533,619	-		MIT1002_04040	0.14	-2.9
4,533,691	-		MIT1002_04040	0.19	-2.4
4,533,741	+		MIT1002_04040	0.22	-4.2
4,533,741	-		MIT1002_04040	0.22	-2.3
4,533,741	-		MIT1002_04040	0.22	-1.2
4,533,743	+		MIT1002_04040	0.22	+1.2
4,533,743	+		MIT1002_04040	0.22	-0.8
4,533,743	+		MIT1002_04040	0.22	-0.2
4,533,743	+		MIT1002_04040	0.22	+0.4
4,533,751	-		MIT1002_04040	0.23	+0.2
4,533,751	-		MIT1002_04040	0.23	+1.2
4,533,751	-		MIT1002_04040	0.23	-3.2
4,533,751	-		MIT1002_04040	0.23	-2.1
4,533,751	-		MIT1002_04040	0.23	-2.7
4,533,751	-		MIT1002_04040	0.23	-4.1
4,533,751	-		MIT1002_04040	0.23	-1.6
4,533,751	-		MIT1002_04040	0.23	-2.2
4,533,751	-		MIT1002_04040	0.23	-1.5
4,533,751	-		MIT1002_04040	0.23	-0.4
4,533,798	+		MIT1002_04040	0.26	-2.4
4,533,798	+		MIT1002_04040	0.26	-2.4
4,533,798	+		MIT1002_04040	0.26	-3.2
4,533,806	-		MIT1002_04040	0.26	+0.8
4,533,806	-		MIT1002_04040	0.26	-3.1
4,533,806	-		MIT1002_04040	0.26	-1.7
4,533,806	-		MIT1002_04040	0.26	-1.3
4,533,806	-		MIT1002_04040	0.26	-5.0
4,533,813	-		MIT1002_04040	0.27	-8.4
4,533,909	+		MIT1002_04040	0.33	-0.4
4,533,976	-		MIT1002_04040	0.37	-1.5
4,533,988	+		MIT1002_04040	0.38	-2.6
4,533,996	-		MIT1002_04040	0.38	-0.9
4,534,173	-		MIT1002_04040	0.50	-2.8
4,534,302	-		MIT1002_04040	0.58	-2.0
4,534,354	+		MIT1002_04040	0.62	+0.2
4,534,379	+		MIT1002_04040	0.63	-9.4
4,534,450	+		MIT1002_04040	0.68	-2.5
4,534,458	-		MIT1002_04040	0.68	-1.8
4,534,460	-		MIT1002_04040	0.68	-2.7
4,534,460	-		MIT1002_04040	0.68	-3.7
4,534,460	-		MIT1002_04040	0.68	-2.7
4,534,465	-		MIT1002_04040	0.69	-2.3
4,534,465	-		MIT1002_04040	0.69	-3.9
4,534,465	-		MIT1002_04040	0.69	-0.7
4,534,490	+		MIT1002_04040	0.70	-1.2
4,534,502	+		MIT1002_04040	0.71	-5.0
4,534,503	-		MIT1002_04040	0.71	-2.0
4,534,503	-		MIT1002_04040	0.71	-2.9
4,534,511	-		MIT1002_04040	0.72	-3.8
4,534,528	-		MIT1002_04040	0.73	-2.2
4,534,563	-		MIT1002_04040	0.75	-2.2
4,534,598	+		MIT1002_04040	0.77	-0.9
4,534,600	+		MIT1002_04040	0.77	-3.7
4,534,662	-		MIT1002_04040	0.81	-3.7
4,534,677	-		MIT1002_04040	0.82	-4.3
4,534,689	-		MIT1002_04040	0.83	-2.4
4,534,696	-		MIT1002_04040	0.84	-3.5
4,534,771	-		MIT1002_04040	0.88	-1.9
4,534,771	-		MIT1002_04040	0.88	-4.7
4,534,780	+		MIT1002_04040	0.89	-3.7
4,534,780	+		MIT1002_04040	0.89	-3.6
4,534,807	-				-2.7
4,534,843	-				-4.5
4,535,021	+				-3.2
4,535,028	-				-2.9
4,535,146	+		MIT1002_04041	0.11	-2.2
4,535,191	-		MIT1002_04041	0.13	-2.2
4,535,216	-		MIT1002_04041	0.14	-1.5
4,535,225	+		MIT1002_04041	0.15	-3.9
4,535,289	-		MIT1002_04041	0.18	-0.2
4,535,289	-		MIT1002_04041	0.18	-2.1
4,535,357	+		MIT1002_04041	0.22	-1.0
4,535,358	-		MIT1002_04041	0.22	-0.9
4,535,546	-		MIT1002_04041	0.32	-3.9
4,535,552	-		MIT1002_04041	0.32	-2.9
4,535,696	+		MIT1002_04041	0.40	-2.8
4,535,777	+		MIT1002_04041	0.45	-1.0
4,535,785	-		MIT1002_04041	0.45	-2.6
4,535,785	-		MIT1002_04041	0.45	-2.3
4,535,785	-		MIT1002_04041	0.45	-1.1
4,535,821	+		MIT1002_04041	0.47	-0.7
4,535,821	+		MIT1002_04041	0.47	-1.1
4,535,828	-		MIT1002_04041	0.47	-2.9
4,535,839	+		MIT1002_04041	0.48	-4.7
4,535,880	-		MIT1002_04041	0.50	-1.9