Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04036

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,522,699	-		MIT1002_04035	0.66	-1.6
4,522,699	-		MIT1002_04035	0.66	-0.4
4,522,899	-		MIT1002_04035	0.83	-1.3
4,522,941	+		MIT1002_04035	0.87	-2.9
4,522,962	+		MIT1002_04035	0.89	+1.3
4,522,970	-		MIT1002_04035	0.90	-2.4
4,522,970	-		MIT1002_04035	0.90	-1.3
4,523,090	+				+0.6
4,523,101	+				-1.8
4,523,109	-				-1.2
4,523,148	-				-2.5
4,523,155	-				-2.5
4,523,155	-				-0.2
4,523,178	-				+1.2
4,523,252	-				-0.7
4,523,366	-				+2.5
4,523,572	+				-0.3
4,523,695	-				+0.8
4,523,782	+		MIT1002_04036	0.17	+1.2
4,523,859	-		MIT1002_04036	0.30	-0.4
4,523,886	-		MIT1002_04036	0.34	-0.3
4,524,015	-		MIT1002_04036	0.54	-2.6
4,524,054	-		MIT1002_04036	0.61	-3.6
4,524,361	-				-0.4
4,524,391	-				-1.3
4,524,463	-				+0.2
4,524,473	+				-2.0
4,524,481	-				+2.4
4,524,514	+				+0.2
4,524,522	-				+0.6
4,524,522	-				-0.3
4,524,522	-				+0.7
4,524,542	-				-0.9
4,524,637	+				+0.7
4,524,671	-				+0.3
4,524,676	-				-0.5
4,524,688	+				+0.7
4,524,696	+				+2.2
4,524,706	-				-0.2
4,524,893	-		MIT1002_04037	0.13	+0.4
4,524,893	-		MIT1002_04037	0.13	+0.6
4,524,898	-		MIT1002_04037	0.14	+0.4
4,524,911	-		MIT1002_04037	0.14	-1.7
4,525,093	-		MIT1002_04037	0.19	-0.4
4,525,137	+		MIT1002_04037	0.20	+0.7
4,525,152	+		MIT1002_04037	0.21	-1.2
4,525,152	+		MIT1002_04037	0.21	-0.2
4,525,152	+		MIT1002_04037	0.21	-0.9
4,525,152	+		MIT1002_04037	0.21	-2.7
4,525,152	+		MIT1002_04037	0.21	-0.0
4,525,160	-		MIT1002_04037	0.21	-0.7
4,525,201	+		MIT1002_04037	0.22	-1.4
4,525,204	-		MIT1002_04037	0.22	+0.7
4,525,246	+		MIT1002_04037	0.23	+0.6
4,525,246	+		MIT1002_04037	0.23	-0.2
4,525,246	+		MIT1002_04037	0.23	-0.3
4,525,246	+		MIT1002_04037	0.23	+0.1
4,525,246	+		MIT1002_04037	0.23	+2.0
4,525,246	+		MIT1002_04037	0.23	-2.4
4,525,246	+		MIT1002_04037	0.23	-0.1
4,525,246	+		MIT1002_04037	0.23	-1.0
4,525,246	+		MIT1002_04037	0.23	+2.2
4,525,254	-		MIT1002_04037	0.24	+1.6
4,525,254	-		MIT1002_04037	0.24	-2.2
4,525,254	-		MIT1002_04037	0.24	-1.6
4,525,254	-		MIT1002_04037	0.24	+0.8
4,525,254	-		MIT1002_04037	0.24	-1.5
4,525,254	-		MIT1002_04037	0.24	-1.5
4,525,254	-		MIT1002_04037	0.24	-1.3
4,525,265	+		MIT1002_04037	0.24	-1.7