Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04008

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,493,426	-				-1.0
4,493,436	-				-0.0
4,493,436	-				+1.0
4,493,488	+				-0.6
4,493,490	-				-1.4
4,493,494	-				-1.7
4,493,496	-				+1.2
4,493,520	-				-1.4
4,493,521	+				-1.2
4,493,523	+				+0.6
4,493,523	+				-2.3
4,493,529	-				+1.2
4,493,533	+				-0.9
4,493,533	+				+0.5
4,493,533	+				-0.8
4,493,533	+				-0.5
4,493,533	+				-0.5
4,493,533	+				-1.7
4,493,541	-				+0.6
4,493,541	-				-2.4
4,493,548	+				-0.0
4,493,557	-				+0.4
4,493,561	-				-2.1
4,493,625	-				+0.3
4,493,639	-				+1.7
4,493,661	+				+0.4
4,493,814	+		MIT1002_04007	0.28	+0.6
4,493,859	+		MIT1002_04007	0.34	+0.8
4,493,880	-		MIT1002_04007	0.36	+0.1
4,494,089	-		MIT1002_04007	0.63	-1.2
4,494,107	+		MIT1002_04007	0.65	-1.3
4,494,135	+		MIT1002_04007	0.69	-1.1
4,494,140	+		MIT1002_04007	0.69	+0.7
4,494,140	+		MIT1002_04007	0.69	-3.4
4,494,140	+		MIT1002_04007	0.69	-0.1
4,494,140	+		MIT1002_04007	0.69	-0.7
4,494,207	+		MIT1002_04007	0.78	+2.1
4,494,346	+				-1.6
4,494,354	-				-0.2
4,494,360	-				-2.6
4,494,382	-				-1.4
4,495,662	+				-3.2
4,495,687	+				-2.7
4,495,820	-				-1.8
4,495,951	+				-0.7
4,495,953	+				+0.2
4,495,968	+				-2.0
4,495,976	+		MIT1002_04010	0.11	+1.4
4,495,976	-		MIT1002_04010	0.11	-3.0
4,495,983	+		MIT1002_04010	0.14	-0.5
4,495,990	-		MIT1002_04010	0.17	+0.5
4,495,991	-		MIT1002_04010	0.17	+1.2
4,496,028	+		MIT1002_04010	0.32	-1.4
4,496,029	-		MIT1002_04010	0.32	+0.7
4,496,071	+		MIT1002_04010	0.49	-0.5
4,496,077	-		MIT1002_04010	0.51	-1.5
4,496,107	+		MIT1002_04010	0.63	-0.6
4,496,113	-		MIT1002_04010	0.65	-0.4
4,496,113	-		MIT1002_04010	0.65	-0.9