Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03913

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,386,134	+		MIT1002_03911	0.84	+0.1
4,386,204	+		MIT1002_03911	0.89	+2.0
4,386,204	+		MIT1002_03911	0.89	+0.6
4,386,212	-		MIT1002_03911	0.89	+0.7
4,386,212	-		MIT1002_03911	0.89	+2.6
4,386,212	-		MIT1002_03911	0.89	-1.0
4,386,212	-		MIT1002_03911	0.89	+1.3
4,386,214	+		MIT1002_03911	0.89	+0.9
4,386,217	-		MIT1002_03911	0.89	+1.4
4,386,219	+		MIT1002_03911	0.89	+1.5
4,386,222	-		MIT1002_03911	0.90	+1.5
4,386,234	-				-0.3
4,386,279	+				+0.3
4,386,324	+				+0.1
4,386,408	-				-2.1
4,386,504	-		MIT1002_03912	0.13	+0.8
4,386,513	+		MIT1002_03912	0.14	+0.8
4,386,570	+		MIT1002_03912	0.22	+1.6
4,386,578	-		MIT1002_03912	0.23	+0.9
4,386,603	+		MIT1002_03912	0.26	+0.9
4,386,654	-		MIT1002_03912	0.33	+0.4
4,386,661	-		MIT1002_03912	0.34	+0.0
4,386,678	-		MIT1002_03912	0.36	+1.0
4,386,726	+		MIT1002_03912	0.42	+1.0
4,386,795	+		MIT1002_03912	0.52	+0.4
4,386,813	-		MIT1002_03912	0.54	-0.3
4,386,818	-		MIT1002_03912	0.55	+1.2
4,386,906	-		MIT1002_03912	0.67	+1.7
4,386,906	-		MIT1002_03912	0.67	+1.1
4,386,914	+		MIT1002_03912	0.68	+1.1
4,386,955	+		MIT1002_03912	0.73	+1.4
4,386,965	+		MIT1002_03912	0.75	+3.4
4,386,965	+		MIT1002_03912	0.75	+3.0
4,386,967	+		MIT1002_03912	0.75	+1.7
4,386,973	-		MIT1002_03912	0.76	+0.2
4,386,975	-		MIT1002_03912	0.76	+1.2
4,386,975	-		MIT1002_03912	0.76	+0.1
4,387,000	+		MIT1002_03912	0.79	+1.4
4,387,005	+		MIT1002_03912	0.80	-0.8
4,387,067	-		MIT1002_03912	0.88	-0.3
4,387,067	-		MIT1002_03912	0.88	+1.5
4,387,083	+				+0.6
4,387,196	+				-1.3
4,387,205	-		MIT1002_03913	0.10	-1.4
4,387,274	+		MIT1002_03913	0.20	-4.3
4,387,302	+		MIT1002_03913	0.24	-1.1
4,387,302	+		MIT1002_03913	0.24	-1.2
4,387,302	+		MIT1002_03913	0.24	-0.4
4,387,310	-		MIT1002_03913	0.25	-2.3
4,387,315	+		MIT1002_03913	0.26	-1.1
4,387,317	+		MIT1002_03913	0.26	-0.3
4,387,317	+		MIT1002_03913	0.26	-3.0
4,387,317	+		MIT1002_03913	0.26	-4.5
4,387,323	-		MIT1002_03913	0.27	-1.3
4,387,323	-		MIT1002_03913	0.27	-2.9
4,387,323	-		MIT1002_03913	0.27	-3.5
4,387,325	-		MIT1002_03913	0.27	-1.2
4,387,453	-		MIT1002_03913	0.45	-3.3
4,387,496	-		MIT1002_03913	0.51	-1.8
4,387,528	+		MIT1002_03913	0.56	-2.2
4,387,528	+		MIT1002_03913	0.56	-2.2
4,387,536	-		MIT1002_03913	0.57	-2.1
4,387,538	+		MIT1002_03913	0.57	+0.6
4,387,538	+		MIT1002_03913	0.57	-3.0
4,387,538	+		MIT1002_03913	0.57	-0.7
4,387,540	+		MIT1002_03913	0.58	-0.6
4,387,546	-		MIT1002_03913	0.58	-3.4
4,387,576	-		MIT1002_03913	0.63	-1.0
4,387,578	+		MIT1002_03913	0.63	-2.2
4,387,578	+		MIT1002_03913	0.63	-3.4
4,387,578	+		MIT1002_03913	0.63	-0.3
4,387,578	+		MIT1002_03913	0.63	-0.0
4,387,578	+		MIT1002_03913	0.63	-1.9
4,387,578	+		MIT1002_03913	0.63	+0.1
4,387,578	+		MIT1002_03913	0.63	-0.0
4,387,578	+		MIT1002_03913	0.63	-3.3
4,387,578	+		MIT1002_03913	0.63	-3.3
4,387,578	+		MIT1002_03913	0.63	-2.5
4,387,578	+		MIT1002_03913	0.63	-1.5
4,387,586	-		MIT1002_03913	0.64	-3.7
4,387,586	-		MIT1002_03913	0.64	-4.4
4,387,586	-		MIT1002_03913	0.64	-2.4
4,387,586	-		MIT1002_03913	0.64	+0.1
4,387,586	-		MIT1002_03913	0.64	-2.9
4,387,586	-		MIT1002_03913	0.64	-2.9
4,387,586	-		MIT1002_03913	0.64	-4.0
4,387,659	+		MIT1002_03913	0.74	-1.7
4,387,706	-		MIT1002_03913	0.81	-1.4
4,387,723	+		MIT1002_03913	0.83	-0.2
4,387,723	+		MIT1002_03913	0.83	-1.9
4,387,723	+		MIT1002_03913	0.83	-3.8
4,387,723	+		MIT1002_03913	0.83	-1.9
4,387,723	+		MIT1002_03913	0.83	-0.9
4,387,723	+		MIT1002_03913	0.83	-3.0
4,387,725	+		MIT1002_03913	0.84	-0.7
4,387,725	+		MIT1002_03913	0.84	-2.3
4,387,732	-		MIT1002_03913	0.85	-0.8
4,387,733	-		MIT1002_03913	0.85	-3.8
4,387,898	+				-0.0
4,387,908	+				+0.0
4,387,908	+				-2.1
4,387,964	-				-1.8
4,387,997	+				-1.1
4,388,038	+				-2.7
4,388,140	-		MIT1002_03914	0.14	+0.7
4,388,140	-		MIT1002_03914	0.14	-1.7
4,388,142	-		MIT1002_03914	0.14	+0.1
4,388,184	-		MIT1002_03914	0.17	+1.1
4,388,202	+		MIT1002_03914	0.18	+0.1
4,388,301	+		MIT1002_03914	0.25	+0.9
4,388,305	+		MIT1002_03914	0.25	-1.8
4,388,355	-		MIT1002_03914	0.29	+1.8
4,388,411	+		MIT1002_03914	0.33	+0.7
4,388,411	+		MIT1002_03914	0.33	+1.4
4,388,411	+		MIT1002_03914	0.33	-1.2
4,388,411	+		MIT1002_03914	0.33	-2.1
4,388,411	+		MIT1002_03914	0.33	-0.0
4,388,411	+		MIT1002_03914	0.33	-1.2
4,388,411	+		MIT1002_03914	0.33	+1.9
4,388,419	-		MIT1002_03914	0.33	+0.7
4,388,419	-		MIT1002_03914	0.33	-1.2
4,388,419	-		MIT1002_03914	0.33	+0.8
4,388,419	-		MIT1002_03914	0.33	-0.4
4,388,419	-		MIT1002_03914	0.33	+0.0
4,388,419	-		MIT1002_03914	0.33	-0.6
4,388,419	-		MIT1002_03914	0.33	-0.2
4,388,419	-		MIT1002_03914	0.33	+0.7
4,388,419	-		MIT1002_03914	0.33	-1.4
4,388,463	-		MIT1002_03914	0.36	+3.1
4,388,468	-		MIT1002_03914	0.37	-2.6
4,388,488	+		MIT1002_03914	0.38	+0.1
4,388,549	-		MIT1002_03914	0.42	-1.9
4,388,634	+		MIT1002_03914	0.48	-0.0
4,388,649	+		MIT1002_03914	0.49	-1.4
4,388,650	-		MIT1002_03914	0.49	-2.0
4,388,656	+		MIT1002_03914	0.50	+2.6
4,388,656	+		MIT1002_03914	0.50	-0.1
4,388,666	+		MIT1002_03914	0.50	-0.1
4,388,666	+		MIT1002_03914	0.50	+0.2
4,388,811	-		MIT1002_03914	0.61	+1.2