Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03908

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,378,908	+		MIT1002_03907	0.34	-2.0
4,378,914	-		MIT1002_03907	0.34	-7.0
4,378,914	-		MIT1002_03907	0.34	-3.0
4,378,998	-		MIT1002_03907	0.40	-3.1
4,379,041	+		MIT1002_03907	0.43	-3.6
4,379,041	+		MIT1002_03907	0.43	-3.4
4,379,041	+		MIT1002_03907	0.43	-1.7
4,379,041	+		MIT1002_03907	0.43	-2.5
4,379,041	+		MIT1002_03907	0.43	-3.3
4,379,041	+		MIT1002_03907	0.43	-2.8
4,379,048	+		MIT1002_03907	0.44	-3.2
4,379,049	-		MIT1002_03907	0.44	-3.6
4,379,049	-		MIT1002_03907	0.44	-2.8
4,379,120	-		MIT1002_03907	0.49	-1.6
4,379,175	-		MIT1002_03907	0.53	-2.6
4,379,210	-		MIT1002_03907	0.55	+1.1
4,379,226	+		MIT1002_03907	0.57	-0.4
4,379,226	+		MIT1002_03907	0.57	-3.8
4,379,278	-		MIT1002_03907	0.60	-1.5
4,379,388	+		MIT1002_03907	0.68	-3.4
4,379,406	-		MIT1002_03907	0.69	-2.3
4,379,519	+		MIT1002_03907	0.78	+0.8
4,379,527	+		MIT1002_03907	0.78	-2.6
4,379,550	-		MIT1002_03907	0.80	-2.2
4,379,574	+		MIT1002_03907	0.82	-3.7
4,379,687	-		MIT1002_03907	0.90	-4.6
4,379,794	-				+0.1
4,379,803	+				-1.2
4,379,819	+				-2.9
4,379,837	-				-0.2
4,379,862	+				-0.4
4,379,942	-		MIT1002_03908	0.36	-2.6
4,379,986	-		MIT1002_03908	0.51	-1.9
4,380,024	+		MIT1002_03908	0.65	+0.6
4,380,032	-		MIT1002_03908	0.68	-5.7
4,380,032	-		MIT1002_03908	0.68	-2.1
4,380,032	-		MIT1002_03908	0.68	-1.7
4,380,032	-		MIT1002_03908	0.68	-2.6
4,380,032	-		MIT1002_03908	0.68	-2.8
4,380,032	-		MIT1002_03908	0.68	-8.4
4,380,131	-				-3.9
4,380,132	+				-0.0
4,380,154	-				-1.7
4,380,220	+				+1.1
4,380,269	-		MIT1002_03909	0.12	-2.7
4,380,287	-		MIT1002_03909	0.14	-1.0
4,380,308	+		MIT1002_03909	0.16	-1.7
4,380,337	+		MIT1002_03909	0.18	-1.5
4,380,337	+		MIT1002_03909	0.18	-3.4
4,380,345	-		MIT1002_03909	0.19	-2.2
4,380,385	-		MIT1002_03909	0.22	-1.1
4,380,472	-		MIT1002_03909	0.30	-2.7
4,380,495	+		MIT1002_03909	0.32	-8.1
4,380,495	+		MIT1002_03909	0.32	-3.2
4,380,649	-		MIT1002_03909	0.45	-2.6
4,380,666	+		MIT1002_03909	0.47	-0.3
4,380,669	-		MIT1002_03909	0.47	-0.9
4,380,817	+		MIT1002_03909	0.60	-1.7
4,380,875	-		MIT1002_03909	0.65	-1.9
4,380,984	-		MIT1002_03909	0.74	+0.1
4,381,032	-		MIT1002_03909	0.78	-3.8
4,381,043	-		MIT1002_03909	0.79	-2.9
4,381,055	+		MIT1002_03909	0.80	-1.9