Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03845

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,305,903	+		MIT1002_03844	0.38	-0.3
4,305,903	+		MIT1002_03844	0.38	-0.3
4,305,903	+		MIT1002_03844	0.38	-0.9
4,305,911	-		MIT1002_03844	0.39	-1.0
4,305,950	+		MIT1002_03844	0.41	-0.2
4,305,974	+		MIT1002_03844	0.43	-1.0
4,305,974	+		MIT1002_03844	0.43	-3.0
4,305,982	-		MIT1002_03844	0.43	-0.4
4,305,982	-		MIT1002_03844	0.43	-0.2
4,305,982	-		MIT1002_03844	0.43	-0.9
4,305,982	-		MIT1002_03844	0.43	-0.7
4,305,982	-		MIT1002_03844	0.43	-0.7
4,305,998	+		MIT1002_03844	0.44	-1.8
4,306,060	+		MIT1002_03844	0.48	-0.6
4,306,068	-		MIT1002_03844	0.49	+0.1
4,306,068	-		MIT1002_03844	0.49	-3.1
4,306,092	+		MIT1002_03844	0.50	-0.2
4,306,097	+		MIT1002_03844	0.51	-1.7
4,306,175	+		MIT1002_03844	0.56	-1.1
4,306,213	-		MIT1002_03844	0.58	-0.2
4,306,219	+		MIT1002_03844	0.58	-0.8
4,306,335	+		MIT1002_03844	0.66	+0.4
4,306,336	-		MIT1002_03844	0.66	-0.8
4,306,353	+		MIT1002_03844	0.67	+2.0
4,306,421	+		MIT1002_03844	0.71	-0.7
4,306,468	+		MIT1002_03844	0.74	+0.0
4,306,473	+		MIT1002_03844	0.75	+1.6
4,306,486	-		MIT1002_03844	0.75	+0.3
4,306,486	-		MIT1002_03844	0.75	+0.3
4,306,538	-		MIT1002_03844	0.79	+1.9
4,306,596	+		MIT1002_03844	0.82	+1.2
4,306,603	-		MIT1002_03844	0.83	+1.0
4,306,609	+		MIT1002_03844	0.83	-0.9
4,306,612	-		MIT1002_03844	0.83	-1.0
4,306,615	-		MIT1002_03844	0.84	+0.5
4,306,735	+				-0.7
4,306,735	+				+0.7
4,306,863	+				+0.2
4,306,870	+				+0.8
4,306,875	+				-1.6
4,306,880	+				-1.1
4,306,883	-				+1.1
4,306,916	-				-1.5
4,306,916	-				+0.4
4,306,918	+				-0.3
4,306,918	+				+1.6
4,306,918	+				+2.2
4,306,918	+				+0.2
4,306,933	-				-0.8
4,307,028	+				-2.1
4,307,044	+				+0.1
4,307,056	+		MIT1002_03845	0.10	+0.5
4,307,062	-		MIT1002_03845	0.11	-0.9
4,307,062	-		MIT1002_03845	0.11	+1.3
4,307,073	+		MIT1002_03845	0.12	+0.3
4,307,109	+		MIT1002_03845	0.14	-2.1
4,307,117	-		MIT1002_03845	0.14	-0.2
4,307,147	+		MIT1002_03845	0.16	-0.9
4,307,149	+		MIT1002_03845	0.16	-1.1
4,307,149	+		MIT1002_03845	0.16	+2.4
4,307,149	+		MIT1002_03845	0.16	+1.5
4,307,149	+		MIT1002_03845	0.16	-1.1
4,307,149	+		MIT1002_03845	0.16	-0.7
4,307,149	+		MIT1002_03845	0.16	+1.0
4,307,155	-		MIT1002_03845	0.17	-0.5
4,307,157	-		MIT1002_03845	0.17	-0.4
4,307,157	-		MIT1002_03845	0.17	+0.5
4,307,157	-		MIT1002_03845	0.17	-0.8
4,307,228	+		MIT1002_03845	0.21	+0.7
4,307,312	+		MIT1002_03845	0.27	-0.4
4,307,376	-		MIT1002_03845	0.31	-0.8
4,307,386	+		MIT1002_03845	0.31	-0.5
4,307,386	+		MIT1002_03845	0.31	+1.7
4,307,481	+		MIT1002_03845	0.37	+0.6
4,307,530	+		MIT1002_03845	0.40	-1.8
4,307,572	+		MIT1002_03845	0.43	+1.8
4,307,582	+		MIT1002_03845	0.44	+0.8
4,307,621	+		MIT1002_03845	0.46	-0.7
4,307,662	+		MIT1002_03845	0.49	-0.2
4,307,728	+		MIT1002_03845	0.53	-1.4
4,307,728	+		MIT1002_03845	0.53	-0.9
4,307,775	+		MIT1002_03845	0.56	+0.4
4,307,839	-		MIT1002_03845	0.60	-1.5
4,307,848	+		MIT1002_03845	0.60	+0.9
4,307,848	+		MIT1002_03845	0.60	-0.2
4,307,848	+		MIT1002_03845	0.60	+1.9
4,307,856	-		MIT1002_03845	0.61	-1.3
4,307,856	-		MIT1002_03845	0.61	-0.2
4,307,868	-		MIT1002_03845	0.62	-1.3
4,307,985	+		MIT1002_03845	0.69	-0.2
4,307,993	-		MIT1002_03845	0.69	+0.3
4,307,993	-		MIT1002_03845	0.69	-0.4
4,308,000	+		MIT1002_03845	0.70	+0.2
4,308,065	+		MIT1002_03845	0.74	-1.2
4,308,073	-		MIT1002_03845	0.74	-2.0
4,308,073	-		MIT1002_03845	0.74	-1.4
4,308,156	+		MIT1002_03845	0.80	-0.0
4,308,170	+		MIT1002_03845	0.81	-0.4
4,308,170	+		MIT1002_03845	0.81	-1.7
4,308,178	-		MIT1002_03845	0.81	+0.4
4,308,232	-		MIT1002_03845	0.84	-0.5
4,308,307	+		MIT1002_03845	0.89	-0.0
4,308,535	+				-0.5
4,308,535	+				-0.3
4,308,543	-				-1.2
4,308,549	-				+0.7
4,308,588	-				-0.7
4,308,590	+				+0.5
4,308,715	-		MIT1002_03846	0.13	-1.2
4,308,860	-		MIT1002_03846	0.21	+1.7
4,308,863	+		MIT1002_03846	0.21	+1.3
4,308,933	+		MIT1002_03846	0.25	+2.0
4,308,942	+		MIT1002_03846	0.25	+0.5
4,309,027	+		MIT1002_03846	0.30	-0.3
4,309,027	+		MIT1002_03846	0.30	+0.4
4,309,027	+		MIT1002_03846	0.30	+0.1
4,309,035	-		MIT1002_03846	0.30	+0.5
4,309,035	-		MIT1002_03846	0.30	-1.6
4,309,035	-		MIT1002_03846	0.30	-0.1
4,309,059	+		MIT1002_03846	0.31	+0.5
4,309,067	+		MIT1002_03846	0.32	-1.6
4,309,067	-		MIT1002_03846	0.32	+0.7
4,309,068	+		MIT1002_03846	0.32	-0.3
4,309,074	+		MIT1002_03846	0.32	-0.3
4,309,084	+		MIT1002_03846	0.33	+0.1
4,309,092	-		MIT1002_03846	0.33	-1.7
4,309,158	-		MIT1002_03846	0.36	+1.1
4,309,158	-		MIT1002_03846	0.36	+3.5
4,309,166	-		MIT1002_03846	0.37	-1.1
4,309,199	-		MIT1002_03846	0.39	-0.2
4,309,212	+		MIT1002_03846	0.39	+0.5
4,309,231	+		MIT1002_03846	0.40	-1.6
4,309,272	-		MIT1002_03846	0.42	-0.7
4,309,276	+		MIT1002_03846	0.43	+0.8
4,309,285	+		MIT1002_03846	0.43	+0.5
4,309,306	-		MIT1002_03846	0.44	+0.1
4,309,344	+		MIT1002_03846	0.46	+1.7
4,309,418	+		MIT1002_03846	0.50	-2.2
4,309,477	+		MIT1002_03846	0.53	-1.6