Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03699

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,129,635	-		MIT1002_03697	0.69	+0.5
4,129,673	+		MIT1002_03697	0.75	+1.5
4,129,737	-		MIT1002_03697	0.83	+0.4
4,129,752	-		MIT1002_03697	0.85	+0.8
4,129,803	+				-1.0
4,129,839	+				-2.7
4,129,839	+				+0.6
4,129,847	-				+0.6
4,129,847	-				+1.8
4,129,852	+				+2.7
4,129,952	+				+1.1
4,129,960	-				-0.3
4,129,961	-				+0.2
4,130,078	+		MIT1002_03698	0.18	-4.1
4,130,139	-		MIT1002_03698	0.28	-2.4
4,130,166	-		MIT1002_03698	0.32	-0.9
4,130,218	+		MIT1002_03698	0.39	-1.4
4,130,226	-		MIT1002_03698	0.41	-2.0
4,130,263	+		MIT1002_03698	0.46	-1.5
4,130,263	+		MIT1002_03698	0.46	-2.3
4,130,320	+		MIT1002_03698	0.55	-2.8
4,130,381	-		MIT1002_03698	0.64	+0.8
4,130,425	-		MIT1002_03698	0.70	-3.1
4,130,511	-		MIT1002_03698	0.83	-2.8
4,130,511	-		MIT1002_03698	0.83	-2.6
4,130,600	-				+0.6
4,130,644	-				+0.2
4,130,653	-				-2.9
4,130,656	+				+1.1
4,130,679	+				+0.7
4,130,733	+		MIT1002_03699	0.13	-1.9
4,130,772	-		MIT1002_03699	0.18	-1.8
4,130,775	-		MIT1002_03699	0.19	-0.1
4,130,775	-		MIT1002_03699	0.19	-0.0
4,130,889	+		MIT1002_03699	0.33	-1.1
4,130,897	-		MIT1002_03699	0.34	-0.2
4,130,940	+		MIT1002_03699	0.39	+2.5
4,130,948	-		MIT1002_03699	0.40	+0.2
4,130,948	-		MIT1002_03699	0.40	-1.9
4,130,948	-		MIT1002_03699	0.40	+2.1
4,131,020	-		MIT1002_03699	0.49	+2.4
4,131,020	-		MIT1002_03699	0.49	+0.7
4,131,020	-		MIT1002_03699	0.49	+1.8
4,131,098	+		MIT1002_03699	0.58	+0.9
4,131,099	-		MIT1002_03699	0.58	+0.4
4,131,122	-		MIT1002_03699	0.61	-2.3
4,131,164	+		MIT1002_03699	0.66	-2.0
4,131,164	+		MIT1002_03699	0.66	+1.9
4,131,164	+		MIT1002_03699	0.66	-0.7
4,131,172	-		MIT1002_03699	0.67	+0.7
4,131,207	+		MIT1002_03699	0.72	-1.5
4,131,207	+		MIT1002_03699	0.72	+1.4
4,131,215	-		MIT1002_03699	0.73	+0.4
4,131,256	+		MIT1002_03699	0.78	-1.9
4,131,321	-		MIT1002_03699	0.86	-0.5
4,131,357	+				+0.1
4,131,410	+				-0.7
4,131,451	+				-0.0
4,131,456	+				-0.7
4,131,464	-				-0.5
4,131,625	-		MIT1002_03700	0.17	+0.2
4,131,629	+		MIT1002_03700	0.18	-0.3
4,131,662	+		MIT1002_03700	0.21	+0.3
4,131,739	+		MIT1002_03700	0.29	-0.4
4,131,741	-		MIT1002_03700	0.30	-0.8
4,131,765	-		MIT1002_03700	0.32	+1.9
4,131,765	-		MIT1002_03700	0.32	+1.2
4,131,827	+		MIT1002_03700	0.39	+2.4
4,131,835	-		MIT1002_03700	0.40	-0.5
4,131,835	-		MIT1002_03700	0.40	-1.1
4,131,840	-		MIT1002_03700	0.40	+1.2
4,131,867	+		MIT1002_03700	0.43	+1.0
4,131,875	-		MIT1002_03700	0.44	+0.6
4,131,875	-		MIT1002_03700	0.44	-0.7
4,131,905	+		MIT1002_03700	0.47	-0.4
4,131,947	-		MIT1002_03700	0.52	+2.6
4,131,972	+		MIT1002_03700	0.55	-2.6
4,131,979	+		MIT1002_03700	0.55	-0.7
4,132,073	-		MIT1002_03700	0.65	+0.8
4,132,073	-		MIT1002_03700	0.65	+0.6
4,132,080	+		MIT1002_03700	0.66	+0.4
4,132,080	+		MIT1002_03700	0.66	-2.1
4,132,088	-		MIT1002_03700	0.67	+0.2
4,132,208	-		MIT1002_03700	0.80	-1.6
4,132,373	+				-0.1
4,132,437	-				+1.2