Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03670

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,102,114	+		MIT1002_03668	0.75	-1.8
4,102,117	+		MIT1002_03668	0.75	-4.5
4,102,131	-		MIT1002_03668	0.76	-0.7
4,102,131	-		MIT1002_03668	0.76	-2.3
4,102,149	-		MIT1002_03668	0.77	-2.4
4,102,311	+				-1.3
4,102,311	+				-3.4
4,102,329	+				-1.1
4,102,351	+				-3.0
4,102,370	+				-0.7
4,102,370	+				-2.2
4,102,370	+				+0.4
4,102,370	+				-3.9
4,102,378	-				-0.6
4,102,378	-				-1.5
4,102,378	-				-0.2
4,102,378	-				-4.3
4,102,459	+				+2.6
4,102,534	-				-1.1
4,102,826	+		MIT1002_03669	0.71	-1.1
4,102,826	+		MIT1002_03669	0.71	-4.0
4,102,834	-		MIT1002_03669	0.73	-3.2
4,102,860	-		MIT1002_03669	0.81	-2.5
4,102,883	-		MIT1002_03669	0.88	-1.1
4,102,885	+		MIT1002_03669	0.89	-1.8
4,102,885	+		MIT1002_03669	0.89	-0.6
4,102,888	-		MIT1002_03669	0.89	-1.3
4,102,893	-				-1.4
4,102,893	-				-1.1
4,102,893	-				-1.9
4,102,932	-				+1.4
4,102,999	+				-3.1
4,102,999	+				-0.8
4,102,999	+				+2.0
4,102,999	+				-2.3
4,103,007	-				-0.4
4,103,007	-				+0.5
4,103,007	-				-1.5
4,103,007	-				-0.6
4,103,007	-				-2.4
4,103,112	+				-1.9
4,103,184	+		MIT1002_03670	0.11	-3.0
4,103,192	-		MIT1002_03670	0.12	-5.3
4,103,263	+		MIT1002_03670	0.20	-2.5
4,103,293	-		MIT1002_03670	0.24	-3.8
4,103,295	+		MIT1002_03670	0.24	-1.9
4,103,349	+		MIT1002_03670	0.30	-1.4
4,103,465	+		MIT1002_03670	0.43	-1.5
4,103,472	+		MIT1002_03670	0.44	-1.1
4,103,607	+		MIT1002_03670	0.59	-1.1
4,103,616	+		MIT1002_03670	0.60	-4.4
4,103,650	-		MIT1002_03670	0.64	+0.1
4,103,735	-		MIT1002_03670	0.73	-2.4
4,103,752	+		MIT1002_03670	0.75	-2.5
4,103,849	+		MIT1002_03670	0.86	-2.6
4,103,857	-		MIT1002_03670	0.87	-2.7
4,103,857	-		MIT1002_03670	0.87	-1.5
4,103,868	-		MIT1002_03670	0.88	+1.1
4,103,883	+				-1.9
4,103,906	+				-4.6
4,103,914	-				-1.9
4,103,914	-				-0.7
4,103,914	-				-3.3
4,103,929	-				-0.8
4,103,929	-				-2.1
4,103,959	+				-0.5
4,104,057	-				+0.8
4,104,060	+				-2.0
4,104,119	-				+0.3
4,104,128	+				+1.2
4,104,128	+				+0.0
4,104,130	+				+0.3
4,104,147	+				+2.9
4,104,151	+				-0.7
4,104,161	+				+0.6
4,104,161	+				+1.3
4,104,200	+				-2.1
4,104,252	-				+0.0
4,104,321	+		MIT1002_03671	0.14	-1.4
4,104,329	-		MIT1002_03671	0.15	-0.7
4,104,432	+		MIT1002_03671	0.27	-2.5
4,104,499	+		MIT1002_03671	0.34	-2.0
4,104,571	+		MIT1002_03671	0.42	-1.5
4,104,602	-		MIT1002_03671	0.46	+0.5
4,104,608	+		MIT1002_03671	0.46	-0.2
4,104,608	+		MIT1002_03671	0.46	-0.2
4,104,608	+		MIT1002_03671	0.46	-1.4
4,104,608	+		MIT1002_03671	0.46	+1.7
4,104,608	+		MIT1002_03671	0.46	-0.0
4,104,616	-		MIT1002_03671	0.47	-0.2
4,104,616	-		MIT1002_03671	0.47	+1.5
4,104,616	-		MIT1002_03671	0.47	+1.2
4,104,642	+		MIT1002_03671	0.50	-1.5
4,104,650	-		MIT1002_03671	0.51	+0.2
4,104,663	+		MIT1002_03671	0.53	-1.7
4,104,671	-		MIT1002_03671	0.54	-0.4
4,104,681	+		MIT1002_03671	0.55	+1.8
4,104,718	+		MIT1002_03671	0.59	+0.3
4,104,723	+		MIT1002_03671	0.59	+0.3
4,104,748	-		MIT1002_03671	0.62	+2.1
4,104,750	+		MIT1002_03671	0.62	+1.6
4,104,750	+		MIT1002_03671	0.62	+1.1
4,104,750	+		MIT1002_03671	0.62	-1.4
4,104,750	+		MIT1002_03671	0.62	-2.0
4,104,758	-		MIT1002_03671	0.63	-0.0
4,104,758	-		MIT1002_03671	0.63	-1.6
4,104,758	-		MIT1002_03671	0.63	+1.3
4,104,758	-		MIT1002_03671	0.63	-1.8
4,104,758	-		MIT1002_03671	0.63	+2.1
4,104,758	-		MIT1002_03671	0.63	+0.8
4,104,758	-		MIT1002_03671	0.63	-0.5
4,104,758	-		MIT1002_03671	0.63	+0.2
4,104,808	+		MIT1002_03671	0.69	+0.7
4,104,846	-		MIT1002_03671	0.73	+2.9
4,104,887	-		MIT1002_03671	0.78	-0.8
4,104,944	+		MIT1002_03671	0.84	+0.1
4,104,968	+		MIT1002_03671	0.87	-0.1