Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03622

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
4,047,907	-		MIT1002_03621	0.28	-0.1
4,047,911	+		MIT1002_03621	0.28	+1.1
4,047,982	-		MIT1002_03621	0.34	-0.5
4,047,983	+		MIT1002_03621	0.34	-3.0
4,047,983	+		MIT1002_03621	0.34	-0.9
4,047,991	-		MIT1002_03621	0.34	-0.3
4,047,991	-		MIT1002_03621	0.34	-2.5
4,048,006	+		MIT1002_03621	0.35	-2.3
4,048,235	+		MIT1002_03621	0.52	-0.3
4,048,235	+		MIT1002_03621	0.52	-2.7
4,048,244	+		MIT1002_03621	0.53	-1.6
4,048,283	+		MIT1002_03621	0.56	+0.7
4,048,283	+		MIT1002_03621	0.56	-3.4
4,048,285	+		MIT1002_03621	0.56	-2.0
4,048,423	-		MIT1002_03621	0.66	-1.3
4,048,424	+		MIT1002_03621	0.66	+1.1
4,048,442	-		MIT1002_03621	0.67	-1.5
4,048,455	-		MIT1002_03621	0.68	+0.1
4,048,483	-		MIT1002_03621	0.70	-4.0
4,048,491	+		MIT1002_03621	0.71	-1.2
4,048,503	+		MIT1002_03621	0.72	-2.0
4,048,506	-		MIT1002_03621	0.72	-1.3
4,048,530	-		MIT1002_03621	0.74	-2.7
4,048,540	-		MIT1002_03621	0.74	-2.7
4,048,541	-		MIT1002_03621	0.74	-1.7
4,048,588	+		MIT1002_03621	0.78	-2.1
4,048,624	+		MIT1002_03621	0.80	+0.7
4,048,624	+		MIT1002_03621	0.80	-2.7
4,048,674	+		MIT1002_03621	0.84	-2.5
4,048,680	-		MIT1002_03621	0.84	-1.1
4,048,744	+		MIT1002_03621	0.89	-1.3
4,048,781	+				-0.4
4,048,781	-				-2.0
4,048,781	-				-1.8
4,048,794	+				+0.7
4,048,802	-				-2.2
4,048,887	+				-1.8
4,048,887	+				-2.2
4,048,895	-				-4.0
4,048,905	-				-2.1
4,048,957	-				-2.8
4,049,004	+				-2.7
4,049,010	+		MIT1002_03622	0.10	-2.8
4,049,070	-		MIT1002_03622	0.16	-2.5
4,049,161	+		MIT1002_03622	0.25	-2.0
4,049,168	-		MIT1002_03622	0.26	-3.2
4,049,233	+		MIT1002_03622	0.33	-3.1
4,049,246	-		MIT1002_03622	0.34	-4.2
4,049,309	-		MIT1002_03622	0.40	-2.4
4,049,320	+		MIT1002_03622	0.41	-3.5
4,049,328	-		MIT1002_03622	0.42	-1.5
4,049,362	+		MIT1002_03622	0.45	-1.3
4,049,362	+		MIT1002_03622	0.45	-0.9
4,049,370	-		MIT1002_03622	0.46	-2.5
4,049,437	-		MIT1002_03622	0.53	-0.7
4,049,460	+		MIT1002_03622	0.55	-2.4
4,049,481	+		MIT1002_03622	0.57	-2.9
4,049,482	+		MIT1002_03622	0.57	-2.1
4,049,503	+		MIT1002_03622	0.59	-2.3
4,049,511	-		MIT1002_03622	0.60	-4.3
4,049,526	+		MIT1002_03622	0.62	+3.5
4,049,526	+		MIT1002_03622	0.62	-0.3
4,049,534	-		MIT1002_03622	0.62	+0.5
4,049,571	+		MIT1002_03622	0.66	-1.3
4,049,571	+		MIT1002_03622	0.66	+0.5
4,049,571	+		MIT1002_03622	0.66	-5.3
4,049,579	-		MIT1002_03622	0.67	-0.3
4,049,579	-		MIT1002_03622	0.67	-0.9
4,049,579	-		MIT1002_03622	0.67	-2.4
4,049,632	-		MIT1002_03622	0.72	-3.5
4,049,637	-		MIT1002_03622	0.73	-2.0
4,049,637	-		MIT1002_03622	0.73	-3.0
4,049,663	+		MIT1002_03622	0.75	-2.3
4,049,687	-		MIT1002_03622	0.78	-2.6
4,049,697	+		MIT1002_03622	0.79	-1.4
4,049,737	+		MIT1002_03622	0.83	-2.6
4,049,763	-		MIT1002_03622	0.85	-2.2
4,049,797	+		MIT1002_03622	0.88	+1.1
4,049,941	-				-2.0
4,050,003	-				-3.3
4,050,005	+				-2.6
4,050,005	+				-0.9
4,050,007	+				-2.0
4,050,012	+				-1.4
4,050,020	-				-0.7
4,050,153	+				+0.8
4,050,161	-				-0.6
4,050,182	-				-2.0
4,050,183	+				-1.7
4,050,189	+				-0.6
4,050,191	-				+1.8
4,050,191	-				+0.3
4,050,352	+		MIT1002_03623	0.28	+0.5
4,050,352	+		MIT1002_03623	0.28	-2.3
4,050,352	+		MIT1002_03623	0.28	-1.6
4,050,352	+		MIT1002_03623	0.28	-0.3
4,050,352	+		MIT1002_03623	0.28	-1.8
4,050,352	+		MIT1002_03623	0.28	+0.2
4,050,352	+		MIT1002_03623	0.28	+1.6
4,050,352	+		MIT1002_03623	0.28	-2.1
4,050,352	+		MIT1002_03623	0.28	+0.5
4,050,352	+		MIT1002_03623	0.28	-3.8
4,050,352	+		MIT1002_03623	0.28	-1.7
4,050,352	+		MIT1002_03623	0.28	-1.3
4,050,352	+		MIT1002_03623	0.28	-0.7
4,050,352	+		MIT1002_03623	0.28	-1.6
4,050,352	+		MIT1002_03623	0.28	-3.5
4,050,352	+		MIT1002_03623	0.28	-2.3
4,050,352	+		MIT1002_03623	0.28	-1.6
4,050,352	+		MIT1002_03623	0.28	-0.8
4,050,352	+		MIT1002_03623	0.28	-2.8
4,050,352	+		MIT1002_03623	0.28	+0.3
4,050,352	+		MIT1002_03623	0.28	+0.7
4,050,352	+		MIT1002_03623	0.28	-0.5
4,050,355	+		MIT1002_03623	0.30	-0.8
4,050,360	-		MIT1002_03623	0.33	+3.6
4,050,360	-		MIT1002_03623	0.33	-3.8
4,050,360	-		MIT1002_03623	0.33	-2.6
4,050,360	-		MIT1002_03623	0.33	-0.6
4,050,360	-		MIT1002_03623	0.33	+0.1
4,050,360	-		MIT1002_03623	0.33	-1.1
4,050,360	-		MIT1002_03623	0.33	-2.4
4,050,360	-		MIT1002_03623	0.33	-1.0
4,050,360	-		MIT1002_03623	0.33	-0.9
4,050,360	-		MIT1002_03623	0.33	-0.2
4,050,360	-		MIT1002_03623	0.33	-0.2
4,050,360	-		MIT1002_03623	0.33	+0.1
4,050,360	-		MIT1002_03623	0.33	-1.4
4,050,360	-		MIT1002_03623	0.33	-1.3
4,050,360	-		MIT1002_03623	0.33	-1.4
4,050,424	+		MIT1002_03623	0.72	-0.3
4,050,449	+		MIT1002_03623	0.87	-1.9
4,050,540	+				-1.9
4,050,548	-				+0.9
4,050,588	+				+0.9
4,050,648	-				-0.2
4,050,677	-		MIT1002_03624	0.11	-0.5
4,050,679	+		MIT1002_03624	0.11	+0.7
4,050,679	+		MIT1002_03624	0.11	-1.3
4,050,687	-		MIT1002_03624	0.11	-0.0
4,050,762	+		MIT1002_03624	0.16	-1.5
4,050,769	-		MIT1002_03624	0.17	-1.2