Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03446

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,852,232	-		MIT1002_03444	0.83	+1.1
3,852,242	-		MIT1002_03444	0.84	-0.1
3,852,296	+		MIT1002_03444	0.86	+0.7
3,852,302	-		MIT1002_03444	0.87	-0.7
3,852,303	+		MIT1002_03444	0.87	-0.1
3,852,304	-		MIT1002_03444	0.87	+0.7
3,852,309	-		MIT1002_03444	0.87	-2.6
3,852,331	-		MIT1002_03444	0.88	+0.1
3,852,349	-		MIT1002_03444	0.89	-2.3
3,852,349	-		MIT1002_03444	0.89	+1.3
3,852,368	-		MIT1002_03444	0.90	+0.4
3,852,409	+				-2.4
3,852,452	+				-0.8
3,852,462	+				-3.4
3,852,462	+				-0.7
3,852,462	+				-2.9
3,852,470	-				-1.4
3,852,470	-				+0.5
3,852,606	-				-1.0
3,852,606	-				-0.3
3,852,628	+				-2.2
3,852,682	+				-0.1
3,852,744	-				+0.4
3,852,768	+				+0.7
3,852,847	-				-1.3
3,852,854	+				+0.0
3,852,871	+		MIT1002_03445	0.11	+0.1
3,852,969	+		MIT1002_03445	0.37	+0.1
3,852,977	-		MIT1002_03445	0.39	-0.4
3,853,005	-		MIT1002_03445	0.47	-0.2
3,853,030	+		MIT1002_03445	0.53	+2.0
3,853,032	-		MIT1002_03445	0.54	-0.8
3,853,057	-		MIT1002_03445	0.61	+0.6
3,853,089	+		MIT1002_03445	0.69	-0.7
3,853,097	-		MIT1002_03445	0.71	+0.4
3,853,132	-		MIT1002_03445	0.81	+0.7
3,853,134	-		MIT1002_03445	0.81	+0.9
3,853,248	+				-1.0
3,853,248	-				-0.6
3,853,250	+				+0.6
3,853,268	+				-0.1
3,853,270	-				-0.0
3,853,276	-				-0.2
3,853,280	+				-0.7
3,853,286	-		MIT1002_03446	0.11	+0.2
3,853,382	+		MIT1002_03446	0.26	-1.8
3,853,409	-		MIT1002_03446	0.30	+0.2
3,853,511	-		MIT1002_03446	0.46	-1.0
3,853,539	-		MIT1002_03446	0.50	-0.1
3,853,566	+		MIT1002_03446	0.54	+0.4
3,853,566	+		MIT1002_03446	0.54	-0.7
3,853,934	-				+0.4
3,853,942	+				+0.7
3,853,944	-				-1.0
3,853,961	-				-0.2
3,853,971	+				+0.7
3,853,971	+				-0.5
3,853,971	+				-0.3
3,853,971	-				+0.1
3,853,979	-				-2.1
3,853,979	-				+0.2
3,853,985	-				-0.2
3,854,016	+				+0.9
3,854,047	+				+0.8
3,854,085	+				-1.4
3,854,093	-				+0.5
3,854,188	+		MIT1002_03447	0.12	-1.2
3,854,189	-		MIT1002_03447	0.12	+0.2
3,854,189	-		MIT1002_03447	0.12	+0.0
3,854,189	-		MIT1002_03447	0.12	+0.5
3,854,204	+		MIT1002_03447	0.14	-1.9
3,854,257	+		MIT1002_03447	0.19	+1.4
3,854,319	+		MIT1002_03447	0.25	-0.2
3,854,321	+		MIT1002_03447	0.25	-2.2
3,854,327	-		MIT1002_03447	0.25	-0.3
3,854,327	-		MIT1002_03447	0.25	-1.9
3,854,329	+		MIT1002_03447	0.26	+0.3
3,854,362	-		MIT1002_03447	0.29	-0.6
3,854,500	-		MIT1002_03447	0.42	+0.7
3,854,527	+		MIT1002_03447	0.44	-2.5
3,854,527	+		MIT1002_03447	0.44	-2.8
3,854,527	+		MIT1002_03447	0.44	-1.4
3,854,535	-		MIT1002_03447	0.45	+0.0
3,854,535	-		MIT1002_03447	0.45	+0.2
3,854,540	-		MIT1002_03447	0.46	-1.6
3,854,543	+		MIT1002_03447	0.46	-0.4
3,854,543	+		MIT1002_03447	0.46	-0.3
3,854,571	+		MIT1002_03447	0.49	-1.8
3,854,600	-		MIT1002_03447	0.51	-1.4
3,854,600	-		MIT1002_03447	0.51	-0.1
3,854,613	-		MIT1002_03447	0.53	-1.3
3,854,613	-		MIT1002_03447	0.53	+1.3
3,854,621	-		MIT1002_03447	0.53	+0.2
3,854,733	-		MIT1002_03447	0.64	+0.4
3,854,733	-		MIT1002_03447	0.64	-0.9
3,854,733	-		MIT1002_03447	0.64	-1.3
3,854,733	-		MIT1002_03447	0.64	-1.9
3,854,748	-		MIT1002_03447	0.65	-1.8
3,854,755	-		MIT1002_03447	0.66	+0.2
3,854,787	+		MIT1002_03447	0.69	+0.8