Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03350

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,745,293	-				-0.0
3,745,350	+		MIT1002_03349	0.10	+0.7
3,745,350	+		MIT1002_03349	0.10	+0.7
3,745,421	+		MIT1002_03349	0.20	-0.9
3,745,423	+		MIT1002_03349	0.20	-0.1
3,745,423	+		MIT1002_03349	0.20	-3.4
3,745,431	-		MIT1002_03349	0.22	+0.7
3,745,462	+		MIT1002_03349	0.26	-0.9
3,745,514	-		MIT1002_03349	0.33	-0.2
3,745,583	+		MIT1002_03349	0.43	-0.3
3,745,583	+		MIT1002_03349	0.43	-0.4
3,745,591	-		MIT1002_03349	0.44	-0.1
3,745,591	-		MIT1002_03349	0.44	+0.1
3,745,591	-		MIT1002_03349	0.44	-1.6
3,745,607	+		MIT1002_03349	0.46	-2.1
3,745,610	-		MIT1002_03349	0.47	-1.5
3,745,615	-		MIT1002_03349	0.47	-0.3
3,745,615	-		MIT1002_03349	0.47	-1.2
3,745,615	-		MIT1002_03349	0.47	-0.8
3,745,615	-		MIT1002_03349	0.47	-1.9
3,745,625	-		MIT1002_03349	0.49	-0.0
3,745,629	-		MIT1002_03349	0.49	-0.2
3,745,652	+		MIT1002_03349	0.53	-2.1
3,745,653	-		MIT1002_03349	0.53	+0.6
3,745,655	-		MIT1002_03349	0.53	-0.4
3,745,862	+		MIT1002_03349	0.82	-1.5
3,745,867	+		MIT1002_03349	0.83	-1.8
3,745,867	+		MIT1002_03349	0.83	-0.3
3,745,869	+		MIT1002_03349	0.83	+0.8
3,745,875	-		MIT1002_03349	0.84	-0.7
3,745,971	-				+0.7
3,745,998	+				-0.4
3,746,030	-				-0.3
3,746,061	+				-0.2
3,746,066	+				-0.9
3,746,066	+				-0.5
3,746,066	+				-1.9
3,746,066	+				+1.6
3,746,066	+				+0.0
3,746,066	+				+1.9
3,746,066	+				-2.8
3,746,074	-				-0.2
3,746,074	-				+0.2
3,746,074	-				-0.9
3,746,074	-				+1.1
3,746,074	-				-1.2
3,746,074	-				+0.1
3,746,074	-				-0.0
3,746,221	+		MIT1002_03350	0.15	-2.3
3,746,221	+		MIT1002_03350	0.15	+1.3
3,746,227	-		MIT1002_03350	0.16	-0.0
3,746,277	-		MIT1002_03350	0.21	-0.1
3,746,327	+		MIT1002_03350	0.26	+0.6
3,746,357	-		MIT1002_03350	0.29	-3.5
3,746,357	-		MIT1002_03350	0.29	+1.0
3,746,357	-		MIT1002_03350	0.29	-1.0
3,746,359	+		MIT1002_03350	0.30	+1.6
3,746,359	+		MIT1002_03350	0.30	+0.4
3,746,359	+		MIT1002_03350	0.30	+0.8
3,746,367	-		MIT1002_03350	0.30	-2.4
3,746,367	-		MIT1002_03350	0.30	-0.9
3,746,367	-		MIT1002_03350	0.30	-1.1
3,746,369	+		MIT1002_03350	0.31	-0.8
3,746,579	-		MIT1002_03350	0.52	-0.1
3,746,625	-		MIT1002_03350	0.57	-0.8
3,746,632	+		MIT1002_03350	0.57	-0.7
3,746,632	+		MIT1002_03350	0.57	-0.1
3,746,640	-		MIT1002_03350	0.58	+0.4
3,746,658	+		MIT1002_03350	0.60	+2.0
3,746,658	+		MIT1002_03350	0.60	+1.8
3,746,666	-		MIT1002_03350	0.61	-3.6
3,746,668	+		MIT1002_03350	0.61	-0.5
3,746,678	+		MIT1002_03350	0.62	-0.1
3,746,723	-		MIT1002_03350	0.67	+1.1
3,746,774	-		MIT1002_03350	0.72	+1.4
3,746,819	-		MIT1002_03350	0.76	-0.1
3,746,819	-		MIT1002_03350	0.76	-0.1
3,746,953	-				+0.2
3,746,958	-				+0.8
3,746,980	-				-2.7
3,746,997	+				-1.9
3,747,005	-				+1.7
3,747,047	+				+0.9
3,747,049	+				-2.6
3,747,074	+				+0.3
3,747,138	-				+0.2
3,747,230	+				+0.1
3,747,230	+				-0.8
3,747,238	-				-1.8
3,747,238	-				+0.6
3,747,238	-				-0.0
3,747,289	+				+1.3
3,747,355	+				-2.2
3,747,355	+				+1.5
3,747,355	+				+1.0
3,747,375	-				-0.4
3,747,378	+				-1.9
3,747,411	-				+1.5
3,747,436	+				-0.3
3,747,480	+				+0.2
3,747,533	+				+1.4
3,747,605	-				+1.9
3,747,626	+				-1.7
3,747,626	+				+1.1
3,747,626	+				+0.2
3,747,626	+				+0.8
3,747,626	+				-0.3
3,747,626	+				-1.8
3,747,626	+				-1.0
3,747,631	+				+1.8
3,747,634	-				-1.2
3,747,634	-				+0.6
3,747,639	-				+1.1
3,747,648	-				+0.9
3,747,660	+				-2.1
3,747,660	+				-0.2
3,747,660	+				+0.9
3,747,714	-				-0.7
3,747,754	+		MIT1002_03351	0.11	-0.4
3,747,774	+		MIT1002_03351	0.12	+0.7
3,747,774	+		MIT1002_03351	0.12	-0.8
3,747,782	-		MIT1002_03351	0.12	-0.3
3,747,782	-		MIT1002_03351	0.12	+1.4
3,747,823	+		MIT1002_03351	0.14	+2.3
3,747,823	-		MIT1002_03351	0.14	+0.2
3,747,823	-		MIT1002_03351	0.14	+0.0
3,747,824	-		MIT1002_03351	0.14	-0.1
3,747,824	-		MIT1002_03351	0.14	+2.3
3,747,833	+		MIT1002_03351	0.14	-0.3
3,747,833	+		MIT1002_03351	0.14	+0.1
3,747,911	+		MIT1002_03351	0.17	+3.5
3,747,919	+		MIT1002_03351	0.18	+0.2
3,747,919	+		MIT1002_03351	0.18	-1.2
3,747,940	+		MIT1002_03351	0.18	-1.0
3,747,940	-		MIT1002_03351	0.18	-0.2
3,748,016	+		MIT1002_03351	0.21	+0.6