Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03337

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,726,637	+		MIT1002_03336	0.34	-0.3
3,726,765	-		MIT1002_03336	0.43	+1.0
3,726,795	+		MIT1002_03336	0.45	-2.1
3,726,852	+		MIT1002_03336	0.49	+2.5
3,726,880	+		MIT1002_03336	0.50	+0.2
3,726,880	+		MIT1002_03336	0.50	-0.3
3,726,958	-		MIT1002_03336	0.56	+0.1
3,726,967	-		MIT1002_03336	0.57	-2.4
3,726,980	-		MIT1002_03336	0.57	+2.1
3,726,990	-		MIT1002_03336	0.58	+1.7
3,727,027	-		MIT1002_03336	0.61	-2.0
3,727,060	+		MIT1002_03336	0.63	-0.8
3,727,095	+		MIT1002_03336	0.65	+1.8
3,727,102	-		MIT1002_03336	0.66	-0.1
3,727,110	+		MIT1002_03336	0.66	+0.7
3,727,127	+		MIT1002_03336	0.68	+0.9
3,727,185	+		MIT1002_03336	0.72	+0.5
3,727,268	-		MIT1002_03336	0.77	+2.0
3,727,268	-		MIT1002_03336	0.77	+0.6
3,727,311	+		MIT1002_03336	0.80	-0.3
3,727,319	-		MIT1002_03336	0.81	-1.2
3,727,357	+		MIT1002_03336	0.83	-0.6
3,727,449	-		MIT1002_03336	0.90	-1.7
3,727,502	+				-0.2
3,727,510	+				+1.2
3,727,518	-				+2.7
3,727,518	-				-0.2
3,727,535	-				+1.3
3,727,535	-				-2.5
3,727,545	+				-2.0
3,727,558	+				-1.4
3,727,573	-				+0.3
3,727,608	+				+1.3
3,727,617	-				-2.5
3,727,679	+				-1.5
3,727,689	-		MIT1002_03337	0.12	+1.3
3,727,730	-		MIT1002_03337	0.19	+0.9
3,727,736	-		MIT1002_03337	0.20	+0.8
3,727,791	-		MIT1002_03337	0.30	+0.0
3,727,796	-		MIT1002_03337	0.31	+0.7
3,727,797	-		MIT1002_03337	0.31	-0.3
3,727,806	+		MIT1002_03337	0.33	-0.7
3,727,840	+		MIT1002_03337	0.39	-0.6
3,727,879	-		MIT1002_03337	0.47	+0.6
3,727,902	+		MIT1002_03337	0.51	+1.8
3,727,907	-		MIT1002_03337	0.52	+0.4
3,727,985	+		MIT1002_03337	0.66	+0.9
3,727,994	-		MIT1002_03337	0.68	+1.9
3,728,062	-		MIT1002_03337	0.80	-2.7
3,728,063	-		MIT1002_03337	0.80	+1.1
3,728,085	-		MIT1002_03337	0.85	+0.7
3,728,095	-		MIT1002_03337	0.86	-1.2
3,728,171	-				-0.9
3,728,177	+				+1.1
3,728,180	+				+1.3
3,728,180	+				-2.8
3,728,180	+				-0.2
3,728,180	+				-3.3
3,728,180	+				-1.4
3,728,180	+				+0.5
3,728,180	+				-0.0
3,728,186	-				-1.5
3,728,188	-				+1.4
3,728,188	-				-0.6
3,728,190	+				-0.6
3,728,200	+				-0.8
3,728,322	-				+0.0
3,728,396	-				+0.8
3,728,443	+				+0.6
3,728,561	-				+0.2
3,728,585	-				+0.7
3,728,675	-				-1.9
3,728,675	-				+0.5
3,728,682	-				-0.0
3,728,690	-				-0.6
3,728,744	-				-2.8
3,728,802	-				+0.2
3,728,839	+				+2.1
3,728,840	+				-0.3
3,728,960	+		MIT1002_03338	0.14	-0.4
3,729,011	+		MIT1002_03338	0.16	+0.7
3,729,011	+		MIT1002_03338	0.16	-1.1
3,729,019	-		MIT1002_03338	0.16	+2.2
3,729,021	+		MIT1002_03338	0.16	-1.7
3,729,066	-		MIT1002_03338	0.18	-0.5
3,729,126	+		MIT1002_03338	0.20	-0.7
3,729,135	+		MIT1002_03338	0.20	-0.3
3,729,143	-		MIT1002_03338	0.21	-1.2
3,729,143	-		MIT1002_03338	0.21	-1.1
3,729,161	+		MIT1002_03338	0.21	+0.0