Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03185

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,548,129	-				-2.4
3,548,129	-				-0.8
3,548,222	+				+2.2
3,548,300	-				+1.0
3,548,361	-				-0.4
3,548,361	-				+0.1
3,548,408	+				-1.2
3,548,416	-		MIT1002_03184	0.10	-0.4
3,548,470	-		MIT1002_03184	0.19	+1.6
3,548,533	-		MIT1002_03184	0.29	+0.3
3,548,543	+		MIT1002_03184	0.31	-1.1
3,548,560	+		MIT1002_03184	0.33	+2.0
3,548,593	+		MIT1002_03184	0.39	-1.0
3,548,641	+		MIT1002_03184	0.46	+0.2
3,548,641	+		MIT1002_03184	0.46	+0.7
3,548,649	-		MIT1002_03184	0.48	+0.8
3,548,696	+		MIT1002_03184	0.55	-0.3
3,548,704	-		MIT1002_03184	0.56	-2.7
3,548,775	-		MIT1002_03184	0.68	-1.9
3,548,841	+		MIT1002_03184	0.78	+0.8
3,548,853	+		MIT1002_03184	0.80	+0.9
3,548,906	+		MIT1002_03184	0.89	-1.8
3,548,907	-		MIT1002_03184	0.89	+0.2
3,548,937	+				+0.4
3,548,937	+				+1.2
3,548,937	+				+0.4
3,548,937	+				-1.3
3,548,945	-				+1.1
3,548,945	-				+1.6
3,548,945	-				+1.0
3,548,945	-				+0.1
3,548,945	-				+1.0
3,548,945	-				+1.5
3,548,945	-				+1.0
3,548,945	-				-1.3
3,548,945	-				-0.3
3,549,004	+				-2.8
3,549,015	-				+0.3
3,549,015	-				-0.1
3,549,015	-				+1.2
3,549,015	-				-0.9
3,549,015	-				+0.9
3,549,049	+				-0.6
3,549,105	+				+2.2
3,549,147	+				+0.3
3,549,164	+				+0.7
3,549,164	+				+0.1
3,549,243	+		MIT1002_03185	0.12	-5.0
3,549,386	+		MIT1002_03185	0.26	-1.4
3,549,393	-		MIT1002_03185	0.26	-3.2
3,549,418	+		MIT1002_03185	0.29	-2.0
3,549,418	+		MIT1002_03185	0.29	-1.4
3,549,426	-		MIT1002_03185	0.29	-2.7
3,549,494	+		MIT1002_03185	0.36	-3.9
3,549,494	+		MIT1002_03185	0.36	-5.1
3,549,494	+		MIT1002_03185	0.36	-2.4
3,549,502	-		MIT1002_03185	0.36	-1.6
3,549,502	-		MIT1002_03185	0.36	-0.4
3,549,502	-		MIT1002_03185	0.36	+0.1
3,549,565	+		MIT1002_03185	0.42	-0.9
3,549,611	-		MIT1002_03185	0.46	-2.0
3,549,625	+		MIT1002_03185	0.48	-2.4
3,549,625	+		MIT1002_03185	0.48	-2.2
3,549,633	-		MIT1002_03185	0.48	-3.0
3,549,633	-		MIT1002_03185	0.48	-1.6
3,549,633	-		MIT1002_03185	0.48	-2.0
3,549,635	+		MIT1002_03185	0.49	-2.4
3,549,774	+		MIT1002_03185	0.61	-1.9
3,549,791	+		MIT1002_03185	0.63	-2.8
3,549,793	+		MIT1002_03185	0.63	-1.0
3,549,796	-		MIT1002_03185	0.63	-0.9
3,549,839	+		MIT1002_03185	0.67	-2.7
3,549,839	+		MIT1002_03185	0.67	-1.7
3,549,845	-		MIT1002_03185	0.68	+0.9
3,549,888	-		MIT1002_03185	0.72	-3.9
3,550,062	-		MIT1002_03185	0.88	-2.9
3,550,084	+		MIT1002_03185	0.90	-1.1
3,550,126	+				-1.2
3,550,129	-				-1.3
3,550,129	-				-0.1
3,550,380	+		MIT1002_03186	0.14	-0.1
3,550,390	+		MIT1002_03186	0.15	-2.4
3,550,441	+		MIT1002_03186	0.18	-2.7
3,550,441	+		MIT1002_03186	0.18	-4.7
3,550,441	+		MIT1002_03186	0.18	-3.7
3,550,441	+		MIT1002_03186	0.18	-0.3
3,550,441	+		MIT1002_03186	0.18	+0.8
3,550,441	+		MIT1002_03186	0.18	-0.4
3,550,449	-		MIT1002_03186	0.19	-1.6
3,550,515	+		MIT1002_03186	0.24	+0.1
3,550,523	+		MIT1002_03186	0.24	-0.1
3,550,531	-		MIT1002_03186	0.25	-1.4
3,550,531	-		MIT1002_03186	0.25	-1.7
3,550,558	-		MIT1002_03186	0.27	-1.6
3,550,558	-		MIT1002_03186	0.27	-1.7
3,550,590	-		MIT1002_03186	0.29	-6.2
3,550,710	-		MIT1002_03186	0.37	-1.0
3,550,748	-		MIT1002_03186	0.40	-0.8
3,550,949	+		MIT1002_03186	0.54	-2.2
3,550,997	+		MIT1002_03186	0.58	-2.6
3,550,997	+		MIT1002_03186	0.58	-1.5
3,550,997	+		MIT1002_03186	0.58	-1.0
3,550,997	+		MIT1002_03186	0.58	-2.4
3,551,005	-		MIT1002_03186	0.58	-1.1