Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03161

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,524,585	-		MIT1002_03160	0.19	-1.0
3,524,590	-		MIT1002_03160	0.20	+1.0
3,524,633	+		MIT1002_03160	0.24	-0.8
3,524,636	-		MIT1002_03160	0.24	-0.6
3,524,643	+		MIT1002_03160	0.25	+0.7
3,524,648	+		MIT1002_03160	0.25	+0.8
3,524,652	-		MIT1002_03160	0.26	-2.1
3,524,667	+		MIT1002_03160	0.27	-1.2
3,524,782	+		MIT1002_03160	0.39	-1.6
3,524,879	-		MIT1002_03160	0.49	+0.1
3,524,881	+		MIT1002_03160	0.49	-0.1
3,524,881	+		MIT1002_03160	0.49	+0.6
3,524,894	-		MIT1002_03160	0.50	+1.6
3,524,897	+		MIT1002_03160	0.50	+1.6
3,524,897	+		MIT1002_03160	0.50	-0.8
3,524,924	+		MIT1002_03160	0.53	+0.3
3,524,927	-		MIT1002_03160	0.53	-0.0
3,524,931	-		MIT1002_03160	0.54	-0.2
3,524,931	-		MIT1002_03160	0.54	-2.9
3,524,998	-		MIT1002_03160	0.61	+1.2
3,524,999	+		MIT1002_03160	0.61	-0.3
3,525,007	-		MIT1002_03160	0.62	-0.3
3,525,007	-		MIT1002_03160	0.62	+1.2
3,525,017	+		MIT1002_03160	0.63	+0.3
3,525,067	-		MIT1002_03160	0.68	-0.5
3,525,110	+		MIT1002_03160	0.72	+0.6
3,525,118	-		MIT1002_03160	0.73	+0.6
3,525,133	-		MIT1002_03160	0.74	-1.4
3,525,164	+		MIT1002_03160	0.77	-0.2
3,525,172	-		MIT1002_03160	0.78	-1.5
3,525,192	-		MIT1002_03160	0.80	-0.3
3,525,337	+				+0.5
3,525,446	+				-0.7
3,525,454	-				-0.1
3,525,468	-				-0.6
3,525,538	+		MIT1002_03161	0.13	+0.1
3,525,546	-		MIT1002_03161	0.15	-2.1
3,525,556	-		MIT1002_03161	0.17	+1.6
3,525,556	-		MIT1002_03161	0.17	-0.1
3,525,562	+		MIT1002_03161	0.18	+0.5
3,525,603	-		MIT1002_03161	0.25	-0.6
3,525,628	+		MIT1002_03161	0.29	+0.9
3,525,637	+		MIT1002_03161	0.31	+1.3
3,525,692	-		MIT1002_03161	0.40	+0.4
3,525,752	+		MIT1002_03161	0.51	-0.4
3,525,780	-		MIT1002_03161	0.56	-2.9
3,525,782	+		MIT1002_03161	0.56	-0.2
3,525,805	-		MIT1002_03161	0.60	+0.6
3,525,841	-		MIT1002_03161	0.66	-0.3
3,525,851	+		MIT1002_03161	0.68	-1.6
3,525,874	+		MIT1002_03161	0.72	-2.1
3,525,882	-		MIT1002_03161	0.73	-0.0
3,525,887	-		MIT1002_03161	0.74	-2.6
3,525,887	-		MIT1002_03161	0.74	-2.2
3,525,903	-		MIT1002_03161	0.77	-1.2
3,526,041	+				+0.7
3,526,049	-				+3.5
3,526,107	+				-0.6
3,526,142	+				+1.0
3,526,142	+				+1.6
3,526,150	-				-0.4
3,526,170	+				-0.1
3,526,205	+				+1.0
3,526,213	-				-0.8
3,526,213	-				+1.0
3,526,213	-				+1.2
3,526,215	+				-1.7
3,526,215	+				-1.0
3,526,215	-				-0.7
3,526,223	-				-0.9
3,526,223	-				-0.1
3,526,244	-				-1.9
3,526,346	-		MIT1002_03162	0.35	-0.9
3,526,408	-		MIT1002_03162	0.53	+0.8
3,526,516	-		MIT1002_03162	0.84	+0.2
3,526,564	+				-0.9
3,526,565	+				+0.1
3,526,565	+				+2.6
3,526,567	+				-1.7
3,526,578	+				+0.2
3,526,684	+				-1.7
3,526,808	+				+1.0
3,526,855	+				-2.1
3,526,863	-				+0.1
3,526,883	+				-0.6