Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03109

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,462,446	+				+1.9
3,462,455	+				+0.5
3,462,579	-				-0.5
3,462,594	+				+0.5
3,462,594	+				+0.6
3,462,661	-		MIT1002_03108	0.16	-0.1
3,462,663	+		MIT1002_03108	0.17	+0.2
3,462,689	+		MIT1002_03108	0.23	-1.3
3,462,689	+		MIT1002_03108	0.23	+0.3
3,462,689	+		MIT1002_03108	0.23	+1.1
3,462,697	-		MIT1002_03108	0.25	-2.3
3,462,756	+		MIT1002_03108	0.39	-0.1
3,462,827	+		MIT1002_03108	0.57	+0.5
3,462,835	+		MIT1002_03108	0.59	-1.1
3,462,842	+		MIT1002_03108	0.60	-0.9
3,462,850	-		MIT1002_03108	0.62	-0.8
3,462,872	-		MIT1002_03108	0.68	+1.1
3,462,967	-				+0.1
3,463,093	-				+1.8
3,463,093	-				+2.2
3,463,116	-				-0.6
3,463,117	-				-0.4
3,463,135	+				+1.1
3,463,179	-				+2.1
3,463,226	-				+1.6
3,463,226	-				+0.8
3,463,254	-				-1.3
3,463,416	-				-2.2
3,463,556	+		MIT1002_03109	0.21	+0.6
3,463,994	+		MIT1002_03109	0.57	-2.5
3,464,002	-		MIT1002_03109	0.58	-1.6
3,464,017	+		MIT1002_03109	0.59	-1.3
3,464,019	+		MIT1002_03109	0.59	-2.9
3,464,026	+		MIT1002_03109	0.60	-2.2
3,464,027	-		MIT1002_03109	0.60	-1.7
3,464,200	-		MIT1002_03109	0.74	-2.3
3,464,334	+		MIT1002_03109	0.86	+0.3
3,464,342	-		MIT1002_03109	0.86	-0.8
3,464,342	-		MIT1002_03109	0.86	-0.3
3,464,396	+				-1.3
3,464,414	-				-1.0
3,464,581	-				-2.7
3,464,608	-				+1.0
3,464,672	+				-1.8
3,464,764	-				-2.0
3,464,774	-				-1.6
3,464,864	-		MIT1002_03110	0.16	+0.6
3,464,948	+		MIT1002_03110	0.23	-0.9
3,465,102	-		MIT1002_03110	0.37	-2.5
3,465,144	+		MIT1002_03110	0.41	-1.6
3,465,145	+		MIT1002_03110	0.41	-1.1
3,465,150	-		MIT1002_03110	0.41	-0.1
3,465,209	-		MIT1002_03110	0.47	-1.4
3,465,227	+		MIT1002_03110	0.48	-2.0
3,465,227	+		MIT1002_03110	0.48	+0.3
3,465,235	-		MIT1002_03110	0.49	-1.4
3,465,237	-		MIT1002_03110	0.49	+0.6
3,465,300	+		MIT1002_03110	0.55	-1.8
3,465,306	-		MIT1002_03110	0.55	-0.8
3,465,308	+		MIT1002_03110	0.55	+0.1
3,465,325	+		MIT1002_03110	0.57	-0.4
3,465,325	-		MIT1002_03110	0.57	-1.0
3,465,336	+		MIT1002_03110	0.58	-0.7
3,465,447	-		MIT1002_03110	0.68	+0.3
3,465,475	+		MIT1002_03110	0.70	+0.6