Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03089

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,443,576	+		MIT1002_03088	0.15	-0.3
3,443,631	+		MIT1002_03088	0.21	-1.4
3,443,638	-		MIT1002_03088	0.22	-1.4
3,443,654	+		MIT1002_03088	0.24	-0.4
3,443,654	+		MIT1002_03088	0.24	+0.8
3,443,659	+		MIT1002_03088	0.24	-1.5
3,443,662	-		MIT1002_03088	0.25	+0.9
3,443,662	-		MIT1002_03088	0.25	+0.6
3,443,662	-		MIT1002_03088	0.25	+0.1
3,443,662	-		MIT1002_03088	0.25	+0.3
3,443,662	-		MIT1002_03088	0.25	+0.2
3,443,672	+		MIT1002_03088	0.26	+0.1
3,443,685	+		MIT1002_03088	0.27	-2.1
3,443,690	-		MIT1002_03088	0.28	-1.0
3,443,692	+		MIT1002_03088	0.28	-0.7
3,443,750	+		MIT1002_03088	0.35	+1.7
3,443,776	+		MIT1002_03088	0.38	-0.7
3,443,776	+		MIT1002_03088	0.38	-3.4
3,443,776	+		MIT1002_03088	0.38	-0.7
3,443,784	-		MIT1002_03088	0.39	+1.2
3,443,789	+		MIT1002_03088	0.39	+1.4
3,443,795	+		MIT1002_03088	0.40	+0.5
3,443,803	-		MIT1002_03088	0.41	+0.2
3,443,873	+		MIT1002_03088	0.49	-0.5
3,443,874	-		MIT1002_03088	0.49	-0.8
3,443,902	+		MIT1002_03088	0.52	+0.6
3,443,903	+		MIT1002_03088	0.52	+1.1
3,443,957	+		MIT1002_03088	0.58	+0.1
3,443,977	+		MIT1002_03088	0.61	+0.0
3,443,990	+		MIT1002_03088	0.62	-3.9
3,443,997	+		MIT1002_03088	0.63	-0.8
3,444,020	+		MIT1002_03088	0.66	+0.0
3,444,081	+		MIT1002_03088	0.72	+0.5
3,444,108	-		MIT1002_03088	0.76	-1.5
3,444,151	+		MIT1002_03088	0.80	+0.7
3,444,153	+		MIT1002_03088	0.81	+2.1
3,444,159	-		MIT1002_03088	0.81	+1.3
3,444,163	+		MIT1002_03088	0.82	-0.2
3,444,205	-		MIT1002_03088	0.87	-0.8
3,444,328	-				+0.6
3,444,344	-				+0.8
3,444,348	+				+2.5
3,444,348	+				-0.2
3,444,348	+				-1.1
3,444,348	+				+2.6
3,444,348	+				+1.6
3,444,356	-				+0.1
3,444,356	-				-2.3
3,444,356	-				-1.3
3,444,356	-				+0.4
3,444,356	-				+1.0
3,444,356	-				+0.9
3,444,356	-				+0.2
3,444,361	-				-1.5
3,444,582	-				-3.6
3,444,615	+				-1.1
3,444,623	-				+0.3
3,444,674	-		MIT1002_03089	0.14	+0.1
3,444,675	+		MIT1002_03089	0.14	-0.8
3,444,675	+		MIT1002_03089	0.14	-0.3
3,444,678	-		MIT1002_03089	0.14	-2.1
3,444,694	+		MIT1002_03089	0.16	-0.3
3,444,702	-		MIT1002_03089	0.16	-3.3
3,444,702	-		MIT1002_03089	0.16	-2.8
3,444,721	-		MIT1002_03089	0.18	-2.9
3,444,723	+		MIT1002_03089	0.18	-3.2
3,444,736	-		MIT1002_03089	0.19	-0.8
3,444,773	+		MIT1002_03089	0.23	-1.9
3,444,773	+		MIT1002_03089	0.23	-1.7
3,444,773	+		MIT1002_03089	0.23	-2.8
3,444,781	-		MIT1002_03089	0.23	-2.3
3,444,781	-		MIT1002_03089	0.23	-0.1
3,444,781	-		MIT1002_03089	0.23	-3.9
3,444,781	-		MIT1002_03089	0.23	-3.0
3,444,783	+		MIT1002_03089	0.23	-1.3
3,444,783	+		MIT1002_03089	0.23	-1.4
3,444,783	+		MIT1002_03089	0.23	-0.3
3,444,791	-		MIT1002_03089	0.24	-1.7
3,444,809	+		MIT1002_03089	0.26	-5.2
3,444,810	-		MIT1002_03089	0.26	-1.6
3,444,888	-		MIT1002_03089	0.32	-5.4
3,444,893	+		MIT1002_03089	0.33	-2.8
3,444,907	-		MIT1002_03089	0.34	-2.3
3,444,982	+		MIT1002_03089	0.41	-2.7
3,445,048	-		MIT1002_03089	0.46	-2.1
3,445,095	-		MIT1002_03089	0.50	-2.5
3,445,138	+		MIT1002_03089	0.54	-2.0
3,445,248	-		MIT1002_03089	0.64	-3.4
3,445,292	-		MIT1002_03089	0.67	-1.7
3,445,359	-		MIT1002_03089	0.73	-2.0
3,445,359	-		MIT1002_03089	0.73	-2.0
3,445,370	+		MIT1002_03089	0.74	-1.7
3,445,378	-		MIT1002_03089	0.75	-4.3
3,445,423	-		MIT1002_03089	0.79	-1.5
3,445,433	-		MIT1002_03089	0.80	-2.3
3,445,485	+		MIT1002_03089	0.84	-0.8
3,445,493	-		MIT1002_03089	0.85	-2.3
3,445,493	-		MIT1002_03089	0.85	-2.0
3,445,500	+		MIT1002_03089	0.85	+0.1
3,445,502	+		MIT1002_03089	0.85	-3.7
3,445,502	+		MIT1002_03089	0.85	-0.3
3,445,502	+		MIT1002_03089	0.85	-2.4
3,445,508	-		MIT1002_03089	0.86	-2.6
3,445,510	-		MIT1002_03089	0.86	+0.6
3,445,510	-		MIT1002_03089	0.86	-1.6
3,445,510	-		MIT1002_03089	0.86	-2.3
3,445,512	+		MIT1002_03089	0.86	-3.9
3,445,582	+				-2.8
3,445,590	-				-1.3
3,445,657	-				-2.1
3,445,758	-				+0.2
3,445,800	-				-0.4
3,445,853	-		MIT1002_03090	0.15	+1.3
3,445,862	-		MIT1002_03090	0.16	+2.1
3,446,066	-		MIT1002_03090	0.47	-1.4
3,446,105	-		MIT1002_03090	0.53	-1.8
3,446,105	-		MIT1002_03090	0.53	+0.3
3,446,164	+		MIT1002_03090	0.62	+0.4
3,446,198	+		MIT1002_03090	0.68	+0.4
3,446,255	-		MIT1002_03090	0.76	+0.1
3,446,265	+		MIT1002_03090	0.78	-2.8
3,446,280	-		MIT1002_03090	0.80	-0.8
3,446,341	+		MIT1002_03090	0.90	-0.1
3,446,349	-				+1.7
3,446,501	+				+0.9
3,446,506	+				-1.2
3,446,535	-				-0.4