Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MIT1002_03031 and MIT1002_03032 overlap by 4 nucleotides MIT1002_03032 and MIT1002_03033 overlap by 4 nucleotides MIT1002_03033 and MIT1002_03034 overlap by 4 nucleotides MIT1002_03034 and MIT1002_03035 are separated by 491 nucleotides
MIT1002_03031: MIT1002_03031 - Peptidoglycan synthase FtsI precursor, at 3,378,575 to 3,380,350
_03031
MIT1002_03032: MIT1002_03032 - Cell division protein FtsL, at 3,380,347 to 3,380,682
_03032
MIT1002_03033: MIT1002_03033 - Ribosomal RNA small subunit methyltransferase H, at 3,380,679 to 3,381,620
_03033
MIT1002_03034: MIT1002_03034 - cell division protein MraZ, at 3,381,617 to 3,382,075
_03034
MIT1002_03035: MIT1002_03035 - hypothetical protein, at 3,382,567 to 3,383,391
_03035
Position (kb)
3380
3381
3382 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3380.680 kb on - strand at 3380.792 kb on - strand, within MIT1002_03033 at 3380.884 kb on - strand, within MIT1002_03033 at 3381.119 kb on - strand, within MIT1002_03033 at 3381.179 kb on - strand, within MIT1002_03033 at 3381.220 kb on - strand, within MIT1002_03033 at 3381.240 kb on - strand, within MIT1002_03033 at 3381.257 kb on - strand, within MIT1002_03033 at 3381.682 kb on - strand, within MIT1002_03034 at 3381.691 kb on - strand, within MIT1002_03034 at 3381.938 kb on - strand, within MIT1002_03034 at 3381.938 kb on - strand, within MIT1002_03034 at 3381.953 kb on - strand, within MIT1002_03034 at 3381.964 kb on - strand, within MIT1002_03034 at 3381.974 kb on - strand, within MIT1002_03034 at 3381.974 kb on - strand, within MIT1002_03034 at 3382.224 kb on + strand at 3382.237 kb on + strand at 3382.237 kb on + strand at 3382.290 kb on + strand at 3382.292 kb on - strand at 3382.421 kb on - strand at 3382.462 kb on - strand at 3382.465 kb on + strand at 3382.503 kb on + strand at 3382.506 kb on - strand at 3382.606 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6 remove 3,380,680 - -0.3 3,380,792 - MIT1002_03033 0.12 -2.0 3,380,884 - MIT1002_03033 0.22 -0.6 3,381,119 - MIT1002_03033 0.47 -1.4 3,381,179 - MIT1002_03033 0.53 -0.4 3,381,220 - MIT1002_03033 0.57 -1.9 3,381,240 - MIT1002_03033 0.60 -0.4 3,381,257 - MIT1002_03033 0.61 -1.7 3,381,682 - MIT1002_03034 0.14 +0.5 3,381,691 - MIT1002_03034 0.16 +0.3 3,381,938 - MIT1002_03034 0.70 +2.5 3,381,938 - MIT1002_03034 0.70 +1.6 3,381,953 - MIT1002_03034 0.73 -2.6 3,381,964 - MIT1002_03034 0.76 -2.9 3,381,974 - MIT1002_03034 0.78 -4.0 3,381,974 - MIT1002_03034 0.78 -3.8 3,382,224 + +0.3 3,382,237 + -1.0 3,382,237 + -1.9 3,382,290 + -2.0 3,382,292 - -0.3 3,382,421 - -2.1 3,382,462 - -0.9 3,382,465 + -1.8 3,382,503 + -3.0 3,382,506 - -1.9 3,382,606 + +0.1
Or see this region's nucleotide sequence