Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02999

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,338,269	+		MIT1002_02998	0.69	-1.1
3,338,277	-		MIT1002_02998	0.70	-0.2
3,338,277	-		MIT1002_02998	0.70	+0.3
3,338,277	-		MIT1002_02998	0.70	-0.0
3,338,277	-		MIT1002_02998	0.70	-0.3
3,338,277	-		MIT1002_02998	0.70	-0.2
3,338,277	-		MIT1002_02998	0.70	+1.0
3,338,321	+		MIT1002_02998	0.71	+0.3
3,338,329	-		MIT1002_02998	0.71	-0.3
3,338,370	-		MIT1002_02998	0.73	-1.8
3,338,389	+		MIT1002_02998	0.73	+0.2
3,338,539	+		MIT1002_02998	0.78	-3.3
3,338,539	+		MIT1002_02998	0.78	-0.9
3,338,539	+		MIT1002_02998	0.78	+1.3
3,338,540	+		MIT1002_02998	0.78	+2.5
3,338,552	+		MIT1002_02998	0.79	+1.0
3,338,622	-		MIT1002_02998	0.81	-0.2
3,338,645	+		MIT1002_02998	0.82	-0.7
3,338,645	+		MIT1002_02998	0.82	+1.4
3,338,653	-		MIT1002_02998	0.82	-0.4
3,338,732	-		MIT1002_02998	0.84	+0.7
3,338,738	+		MIT1002_02998	0.85	+0.8
3,338,764	-		MIT1002_02998	0.85	-1.6
3,338,773	+		MIT1002_02998	0.86	+0.8
3,338,805	+		MIT1002_02998	0.87	+3.4
3,338,832	+		MIT1002_02998	0.88	-0.4
3,338,897	-		MIT1002_02998	0.90	+0.1
3,338,920	-				-1.3
3,338,944	-				+0.5
3,338,988	-				-2.1
3,339,050	+				+1.6
3,339,276	+				-1.0
3,339,276	+				-1.0
3,339,276	+				-2.7
3,339,368	+		MIT1002_02999	0.12	-0.5
3,339,374	-		MIT1002_02999	0.12	+0.3
3,339,403	+		MIT1002_02999	0.14	-0.5
3,339,413	+		MIT1002_02999	0.15	-1.1
3,339,439	+		MIT1002_02999	0.17	+1.7
3,339,464	-		MIT1002_02999	0.19	-1.2
3,339,493	+		MIT1002_02999	0.21	+1.2
3,339,506	+		MIT1002_02999	0.22	+0.7
3,339,506	+		MIT1002_02999	0.22	+2.3
3,339,536	-		MIT1002_02999	0.25	-1.8
3,339,677	+		MIT1002_02999	0.36	-0.3
3,339,698	+		MIT1002_02999	0.37	-1.7
3,339,699	+		MIT1002_02999	0.37	+1.0
3,339,836	-		MIT1002_02999	0.48	+0.7
3,340,110	-		MIT1002_02999	0.70	+1.1
3,340,129	-		MIT1002_02999	0.71	-0.3
3,340,155	+		MIT1002_02999	0.73	-3.5
3,340,199	+		MIT1002_02999	0.77	+0.3
3,340,220	+		MIT1002_02999	0.78	-0.6
3,340,227	-		MIT1002_02999	0.79	-0.7
3,340,313	+		MIT1002_02999	0.85	-2.2
3,340,313	+		MIT1002_02999	0.85	+1.6
3,340,321	-		MIT1002_02999	0.86	-0.6
3,340,414	+				+1.2
3,340,456	+				+1.1
3,340,456	+				-2.2
3,340,470	-				-0.3
3,340,736	-				+0.8
3,340,741	-				+0.7
3,340,781	+				-1.9
3,340,877	+				-4.0
3,340,968	-				-3.9
3,340,983	-				-0.0
3,340,983	-				-1.3
3,340,983	-				+0.6
3,341,002	+				-1.4
3,341,043	-		MIT1002_03000	0.13	-0.2
3,341,072	+		MIT1002_03000	0.16	+0.3
3,341,072	+		MIT1002_03000	0.16	-4.6
3,341,080	-		MIT1002_03000	0.16	-1.0
3,341,144	+		MIT1002_03000	0.22	-0.4
3,341,160	+		MIT1002_03000	0.24	-0.7
3,341,160	+		MIT1002_03000	0.24	-2.8
3,341,166	-		MIT1002_03000	0.24	-1.3
3,341,168	-		MIT1002_03000	0.24	-0.2
3,341,202	+		MIT1002_03000	0.28	+1.2
3,341,216	+		MIT1002_03000	0.29	-1.4
3,341,231	-		MIT1002_03000	0.30	-2.3
3,341,371	+		MIT1002_03000	0.43	+0.7
3,341,410	+		MIT1002_03000	0.47	+0.3