Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02964

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,296,076	+		MIT1002_02963	0.74	-2.0
3,296,103	-		MIT1002_02963	0.75	-0.4
3,296,158	+		MIT1002_02963	0.77	+0.2
3,296,184	+		MIT1002_02963	0.77	-1.8
3,296,184	+		MIT1002_02963	0.77	-1.9
3,296,324	-		MIT1002_02963	0.82	+0.4
3,296,324	-		MIT1002_02963	0.82	+2.5
3,296,453	+		MIT1002_02963	0.86	+0.1
3,296,514	+		MIT1002_02963	0.88	-2.5
3,296,522	-		MIT1002_02963	0.88	-1.2
3,296,555	-		MIT1002_02963	0.89	+0.9
3,296,719	-				-0.7
3,296,727	-				+0.5
3,296,732	+				-0.1
3,296,762	-				-1.5
3,296,842	+				+1.5
3,297,001	+				-2.5
3,297,086	+		MIT1002_02964	0.18	-1.3
3,297,094	-		MIT1002_02964	0.20	+0.6
3,297,206	+		MIT1002_02964	0.44	-0.4
3,297,223	-		MIT1002_02964	0.48	-1.3
3,297,256	+		MIT1002_02964	0.56	-2.4
3,297,326	-		MIT1002_02964	0.71	-0.9
3,297,326	-		MIT1002_02964	0.71	-0.1
3,297,499	-				+0.1
3,297,501	+				-2.5
3,297,551	+				-1.8
3,297,559	-				+0.5
3,297,601	+				-1.5
3,297,625	+				+0.4
3,297,770	+				+0.8
3,297,770	-				+0.1
3,297,809	+				+0.6
3,297,817	-		MIT1002_02965	0.10	+0.0
3,297,817	-		MIT1002_02965	0.10	+0.0
3,297,825	+		MIT1002_02965	0.10	-0.7
3,297,825	+		MIT1002_02965	0.10	+0.1
3,297,825	+		MIT1002_02965	0.10	+2.2
3,297,825	+		MIT1002_02965	0.10	-0.6
3,297,833	-		MIT1002_02965	0.11	+0.4
3,297,833	-		MIT1002_02965	0.11	+0.2
3,297,833	-		MIT1002_02965	0.11	+0.5
3,297,833	-		MIT1002_02965	0.11	-0.1
3,297,833	-		MIT1002_02965	0.11	-1.1
3,297,848	+		MIT1002_02965	0.11	+1.0
3,297,870	-		MIT1002_02965	0.12	+0.2
3,297,902	+		MIT1002_02965	0.13	-1.6
3,297,904	+		MIT1002_02965	0.13	-1.3
3,297,910	-		MIT1002_02965	0.14	-1.8
3,297,912	-		MIT1002_02965	0.14	+0.6
3,297,946	-		MIT1002_02965	0.15	-2.1
3,297,986	-		MIT1002_02965	0.16	+0.8
3,297,989	+		MIT1002_02965	0.17	-0.7
3,298,021	-		MIT1002_02965	0.18	-0.2
3,298,054	-		MIT1002_02965	0.19	+0.9
3,298,060	-		MIT1002_02965	0.19	+1.8
3,298,060	-		MIT1002_02965	0.19	+1.3
3,298,060	-		MIT1002_02965	0.19	-0.9
3,298,082	-		MIT1002_02965	0.20	-2.6
3,298,150	-		MIT1002_02965	0.23	+0.3
3,298,151	-		MIT1002_02965	0.23	-1.1
3,298,282	+		MIT1002_02965	0.28	-0.6
3,298,384	-		MIT1002_02965	0.31	+1.9