Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02945

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,275,541	-		MIT1002_02943	0.88	+1.2
3,275,587	+				+2.6
3,275,669	+				+0.9
3,275,677	-				-0.5
3,275,684	+				+1.1
3,275,769	+				-0.6
3,275,779	+				+0.5
3,275,979	+		MIT1002_02944	0.25	+0.8
3,275,985	+		MIT1002_02944	0.26	-0.7
3,276,004	-		MIT1002_02944	0.29	-1.2
3,276,054	-		MIT1002_02944	0.38	-0.4
3,276,056	-		MIT1002_02944	0.39	+1.7
3,276,092	+		MIT1002_02944	0.45	+0.1
3,276,100	-		MIT1002_02944	0.46	-2.5
3,276,100	-		MIT1002_02944	0.46	+0.5
3,276,104	+		MIT1002_02944	0.47	-0.4
3,276,107	-		MIT1002_02944	0.48	+0.5
3,276,129	+		MIT1002_02944	0.51	-1.5
3,276,129	+		MIT1002_02944	0.51	-0.6
3,276,129	+		MIT1002_02944	0.51	-0.4
3,276,129	+		MIT1002_02944	0.51	-1.8
3,276,137	-		MIT1002_02944	0.53	-0.9
3,276,158	-		MIT1002_02944	0.56	-0.3
3,276,230	+		MIT1002_02944	0.69	+1.0
3,276,237	+		MIT1002_02944	0.70	+0.9
3,276,306	+		MIT1002_02944	0.82	+0.9
3,276,330	+		MIT1002_02944	0.87	-1.0
3,276,484	-				+1.3
3,276,542	-				-0.7
3,276,547	+				+0.3
3,276,644	+		MIT1002_02945	0.11	+1.6
3,276,682	-		MIT1002_02945	0.13	-0.1
3,276,848	+		MIT1002_02945	0.25	+0.3
3,276,946	+		MIT1002_02945	0.32	+0.0
3,276,949	+		MIT1002_02945	0.32	+0.2
3,277,063	-		MIT1002_02945	0.40	+1.0
3,277,135	+		MIT1002_02945	0.45	-1.6
3,277,184	-		MIT1002_02945	0.48	+2.0
3,277,208	+		MIT1002_02945	0.50	+0.1
3,277,216	-		MIT1002_02945	0.51	-1.3
3,277,217	+		MIT1002_02945	0.51	-3.3
3,277,234	+		MIT1002_02945	0.52	-0.1
3,277,247	-		MIT1002_02945	0.53	+0.9
3,277,403	+		MIT1002_02945	0.64	-1.4
3,277,409	+		MIT1002_02945	0.64	+0.5
3,277,409	+		MIT1002_02945	0.64	-1.4
3,277,451	+		MIT1002_02945	0.67	-1.0
3,277,474	+		MIT1002_02945	0.69	-0.6
3,277,482	-		MIT1002_02945	0.69	-2.5
3,277,482	-		MIT1002_02945	0.69	-0.7
3,277,504	+		MIT1002_02945	0.71	-2.2
3,277,512	-		MIT1002_02945	0.71	+1.9
3,277,527	+		MIT1002_02945	0.72	+0.3
3,277,540	+		MIT1002_02945	0.73	-0.4
3,277,593	-		MIT1002_02945	0.77	-0.4
3,277,651	-		MIT1002_02945	0.81	-1.9
3,277,698	+		MIT1002_02945	0.84	+0.4
3,277,836	-				-2.7
3,277,869	-				-0.5
3,277,895	+				-0.1
3,277,914	-				+1.1
3,277,926	-				+0.1
3,278,195	+		MIT1002_02946	0.13	-1.5
3,278,200	+		MIT1002_02946	0.14	+0.4
3,278,207	+		MIT1002_02946	0.14	+0.6
3,278,208	-		MIT1002_02946	0.15	+1.7
3,278,268	+		MIT1002_02946	0.21	+0.1
3,278,303	+		MIT1002_02946	0.24	-1.2
3,278,303	+		MIT1002_02946	0.24	-3.1
3,278,370	-		MIT1002_02946	0.31	-0.0
3,278,412	+		MIT1002_02946	0.35	+0.8
3,278,420	-		MIT1002_02946	0.36	-0.9
3,278,444	+		MIT1002_02946	0.38	-2.4
3,278,480	+		MIT1002_02946	0.42	+0.6
3,278,480	+		MIT1002_02946	0.42	+0.4
3,278,480	+		MIT1002_02946	0.42	+0.4
3,278,488	-		MIT1002_02946	0.43	-1.3
3,278,500	+		MIT1002_02946	0.44	+1.7
3,278,537	+		MIT1002_02946	0.48	-0.3
3,278,570	+		MIT1002_02946	0.51	+0.1
3,278,617	+		MIT1002_02946	0.56	+0.9
3,278,617	+		MIT1002_02946	0.56	+1.5
3,278,638	+		MIT1002_02946	0.58	+0.3
3,278,643	+		MIT1002_02946	0.58	-1.0
3,278,726	-		MIT1002_02946	0.67	+0.0
3,278,726	-		MIT1002_02946	0.67	+0.8
3,278,770	+		MIT1002_02946	0.71	+1.2
3,278,779	+		MIT1002_02946	0.72	+0.4
3,278,780	+		MIT1002_02946	0.72	+0.9
3,278,789	-		MIT1002_02946	0.73	+0.1
3,278,836	+		MIT1002_02946	0.78	-0.0
3,278,844	-		MIT1002_02946	0.78	-0.6
3,278,844	-		MIT1002_02946	0.78	-0.4
3,278,846	+		MIT1002_02946	0.79	+1.5
3,278,846	+		MIT1002_02946	0.79	-1.2
3,278,846	+		MIT1002_02946	0.79	+1.0
3,278,846	+		MIT1002_02946	0.79	-0.9
3,278,854	+		MIT1002_02946	0.79	-0.7
3,278,854	-		MIT1002_02946	0.79	-0.1
3,278,862	-		MIT1002_02946	0.80	+2.6