Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02929

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,256,691	-		MIT1002_02928	0.76	+0.8
3,256,712	-		MIT1002_02928	0.77	+0.5
3,256,712	-		MIT1002_02928	0.77	-0.6
3,256,743	+		MIT1002_02928	0.78	+0.3
3,256,785	+		MIT1002_02928	0.79	-0.7
3,256,818	-		MIT1002_02928	0.80	-0.4
3,256,894	+		MIT1002_02928	0.82	+1.7
3,256,956	-		MIT1002_02928	0.84	+1.5
3,256,968	-		MIT1002_02928	0.84	+1.1
3,257,028	-		MIT1002_02928	0.86	-1.4
3,257,080	-		MIT1002_02928	0.87	+3.1
3,257,122	+		MIT1002_02928	0.89	+1.4
3,257,165	-		MIT1002_02928	0.90	-1.1
3,257,167	+		MIT1002_02928	0.90	+0.1
3,257,167	+		MIT1002_02928	0.90	+0.9
3,257,167	-		MIT1002_02928	0.90	-1.9
3,257,172	+				+1.6
3,257,172	+				+0.1
3,257,175	-				-0.4
3,257,175	-				+0.4
3,257,212	+				-1.6
3,257,212	+				-0.1
3,257,212	+				-0.2
3,257,212	+				+0.9
3,257,212	+				-0.9
3,257,220	-				-0.5
3,257,220	-				+0.4
3,257,220	-				+0.2
3,257,220	-				+0.6
3,257,351	-				-0.4
3,257,472	-				+0.9
3,257,569	-				+1.3
3,257,588	+				-0.3
3,258,008	-		MIT1002_02929	0.58	-1.3
3,258,139	-		MIT1002_02929	0.82	-1.2
3,258,161	-		MIT1002_02929	0.86	+0.3
3,258,243	-				-1.9
3,258,278	+				-0.4
3,258,310	-				-0.8
3,258,310	-				-1.6
3,258,421	+				-0.6
3,258,421	+				-0.4
3,258,439	-				-0.0
3,258,651	+		MIT1002_02930	0.29	+0.6
3,258,660	-		MIT1002_02930	0.30	+0.6
3,258,699	+		MIT1002_02930	0.35	+0.9
3,258,699	+		MIT1002_02930	0.35	+0.1
3,258,699	+		MIT1002_02930	0.35	-1.3
3,258,723	+		MIT1002_02930	0.38	+0.7
3,258,733	+		MIT1002_02930	0.39	-1.0
3,258,751	+		MIT1002_02930	0.41	-1.4
3,258,792	-		MIT1002_02930	0.46	-1.7
3,258,826	-		MIT1002_02930	0.50	+0.1
3,258,829	-		MIT1002_02930	0.51	+1.0
3,258,932	+		MIT1002_02930	0.63	+0.3
3,259,044	-		MIT1002_02930	0.76	-0.4
3,259,098	+		MIT1002_02930	0.83	-2.7
3,259,106	+		MIT1002_02930	0.84	-0.8
3,259,106	-		MIT1002_02930	0.84	-1.1
3,259,114	-		MIT1002_02930	0.85	-0.6
3,259,114	-		MIT1002_02930	0.85	-1.0
3,259,114	-		MIT1002_02930	0.85	-0.8