Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02854

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,166,523	+		MIT1002_02853	0.10	+0.2
3,166,533	+		MIT1002_02853	0.11	+2.1
3,166,551	-		MIT1002_02853	0.13	-2.3
3,166,567	+		MIT1002_02853	0.15	-0.2
3,166,658	-		MIT1002_02853	0.23	+3.4
3,166,660	+		MIT1002_02853	0.23	-0.3
3,166,665	-		MIT1002_02853	0.24	-0.5
3,166,678	+		MIT1002_02853	0.25	+0.5
3,166,690	+		MIT1002_02853	0.26	-0.7
3,166,692	-		MIT1002_02853	0.26	-0.9
3,166,778	+		MIT1002_02853	0.34	-1.8
3,166,786	-		MIT1002_02853	0.35	+0.9
3,166,792	+		MIT1002_02853	0.35	+0.3
3,166,866	+		MIT1002_02853	0.42	-0.4
3,166,963	+		MIT1002_02853	0.51	+1.8
3,166,989	-		MIT1002_02853	0.54	+1.0
3,167,006	+		MIT1002_02853	0.55	-1.5
3,167,053	+		MIT1002_02853	0.60	-1.7
3,167,133	+		MIT1002_02853	0.67	+0.2
3,167,133	-		MIT1002_02853	0.67	+2.1
3,167,135	+		MIT1002_02853	0.67	-0.7
3,167,143	+		MIT1002_02853	0.68	-0.4
3,167,148	+		MIT1002_02853	0.69	+0.5
3,167,150	+		MIT1002_02853	0.69	-0.3
3,167,156	-		MIT1002_02853	0.69	-2.4
3,167,156	-		MIT1002_02853	0.69	-2.5
3,167,158	-		MIT1002_02853	0.70	+1.4
3,167,188	+		MIT1002_02853	0.72	+0.3
3,167,201	+		MIT1002_02853	0.74	-0.0
3,167,372	-		MIT1002_02853	0.89	-0.9
3,167,380	+				-0.1
3,167,388	-				-2.2
3,167,398	-				-2.8
3,167,461	-				+0.4
3,167,475	-				-1.9
3,167,491	+				-1.0
3,167,565	+				-1.9
3,167,565	+				-2.1
3,167,575	+				-0.1
3,167,661	+				-0.3
3,167,697	+		MIT1002_02854	0.11	-1.6
3,167,867	+		MIT1002_02854	0.19	-0.4
3,167,875	-		MIT1002_02854	0.20	+0.2
3,167,891	+		MIT1002_02854	0.21	+0.8
3,167,904	-		MIT1002_02854	0.21	+2.1
3,167,989	+		MIT1002_02854	0.26	-1.3
3,168,107	-		MIT1002_02854	0.32	-0.4
3,168,124	-		MIT1002_02854	0.33	+0.1
3,168,187	-		MIT1002_02854	0.36	-0.9
3,168,213	+		MIT1002_02854	0.38	+0.9
3,168,213	+		MIT1002_02854	0.38	+0.3
3,168,213	+		MIT1002_02854	0.38	+1.0
3,168,221	-		MIT1002_02854	0.38	-1.9
3,168,257	+		MIT1002_02854	0.40	-2.8
3,168,289	+		MIT1002_02854	0.42	-0.1
3,168,298	-		MIT1002_02854	0.42	+1.1
3,168,299	+		MIT1002_02854	0.42	+0.5
3,168,299	+		MIT1002_02854	0.42	-1.9
3,168,376	+		MIT1002_02854	0.46	-0.2
3,168,384	-		MIT1002_02854	0.47	+0.1
3,168,384	-		MIT1002_02854	0.47	-0.4
3,168,467	+		MIT1002_02854	0.51	+0.4
3,168,467	+		MIT1002_02854	0.51	-1.1
3,168,467	+		MIT1002_02854	0.51	-1.6
3,168,475	-		MIT1002_02854	0.51	-0.3
3,168,475	-		MIT1002_02854	0.51	-1.1
3,168,518	-		MIT1002_02854	0.54	+0.3
3,168,523	-		MIT1002_02854	0.54	+1.2
3,168,563	+		MIT1002_02854	0.56	-3.5
3,168,667	+		MIT1002_02854	0.62	+0.3
3,168,758	+		MIT1002_02854	0.66	+1.1
3,168,795	-		MIT1002_02854	0.68	-0.7
3,168,881	+		MIT1002_02854	0.73	-0.2
3,168,881	+		MIT1002_02854	0.73	-0.8
3,168,884	-		MIT1002_02854	0.73	+0.9
3,168,888	-		MIT1002_02854	0.73	-2.5
3,168,888	-		MIT1002_02854	0.73	+0.2
3,168,889	-		MIT1002_02854	0.73	-2.1
3,168,907	+		MIT1002_02854	0.74	-2.0
3,168,908	+		MIT1002_02854	0.74	+0.5
3,168,916	-		MIT1002_02854	0.75	+0.1
3,168,916	-		MIT1002_02854	0.75	-1.2
3,168,916	-		MIT1002_02854	0.75	+1.8
3,168,942	+		MIT1002_02854	0.76	+0.3
3,168,976	-		MIT1002_02854	0.78	-0.7
3,168,990	-		MIT1002_02854	0.78	+1.2
3,169,004	+		MIT1002_02854	0.79	-0.2
3,169,004	+		MIT1002_02854	0.79	-1.8
3,169,012	-		MIT1002_02854	0.80	-0.8
3,169,012	-		MIT1002_02854	0.80	-2.1
3,169,024	+		MIT1002_02854	0.80	-0.1
3,169,047	+		MIT1002_02854	0.81	+1.2
3,169,047	+		MIT1002_02854	0.81	+0.4
3,169,052	+		MIT1002_02854	0.82	-0.4
3,169,055	-		MIT1002_02854	0.82	-0.9
3,169,057	+		MIT1002_02854	0.82	-0.4
3,169,057	+		MIT1002_02854	0.82	+1.9
3,169,057	+		MIT1002_02854	0.82	-0.0
3,169,060	-		MIT1002_02854	0.82	+0.5
3,169,062	+		MIT1002_02854	0.82	+0.4
3,169,065	-		MIT1002_02854	0.82	-0.3
3,169,065	-		MIT1002_02854	0.82	-2.5
3,169,065	-		MIT1002_02854	0.82	+0.2
3,169,067	+		MIT1002_02854	0.83	-3.5
3,169,067	+		MIT1002_02854	0.83	-0.1
3,169,074	+		MIT1002_02854	0.83	-3.7
3,169,116	+		MIT1002_02854	0.85	-0.6
3,169,116	+		MIT1002_02854	0.85	-1.5
3,169,188	+		MIT1002_02854	0.89	-0.3
3,169,196	-		MIT1002_02854	0.89	+0.9
3,169,196	-		MIT1002_02854	0.89	-1.8
3,169,196	-		MIT1002_02854	0.89	+1.0
3,169,247	-				+1.3
3,169,302	+				-0.7
3,169,302	+				+0.1
3,169,310	-				-2.1
3,169,317	+				+0.7
3,169,317	-				-0.9
3,169,319	+				-0.8
3,169,324	+				-2.4
3,169,324	+				-3.0
3,169,327	-				-0.3
3,169,327	-				-2.1
3,169,327	-				-0.1
3,169,327	-				+0.1
3,169,327	-				-1.5
3,169,332	-				-2.4
3,169,363	-				-0.9
3,169,414	+				-1.3
3,169,666	-		MIT1002_02855	0.24	-1.0
3,169,681	-		MIT1002_02855	0.26	+1.2
3,169,682	-		MIT1002_02855	0.26	+0.7
3,169,744	-		MIT1002_02855	0.32	-1.3
3,169,795	-		MIT1002_02855	0.36	+0.0
3,169,801	-		MIT1002_02855	0.37	-0.1
3,169,811	-		MIT1002_02855	0.38	+1.0
3,169,907	+		MIT1002_02855	0.46	-0.8
3,170,053	-		MIT1002_02855	0.59	+1.6
3,170,094	-		MIT1002_02855	0.63	-2.9
3,170,161	-		MIT1002_02855	0.69	+1.2
3,170,165	+		MIT1002_02855	0.70	-2.0
3,170,217	-		MIT1002_02855	0.74	-0.1
3,170,261	+		MIT1002_02855	0.78	+0.6
3,170,261	+		MIT1002_02855	0.78	+0.8
3,170,269	-		MIT1002_02855	0.79	+2.9
3,170,269	-		MIT1002_02855	0.79	+0.3
3,170,279	+		MIT1002_02855	0.80	+0.6
3,170,279	-		MIT1002_02855	0.80	+1.0
3,170,287	-		MIT1002_02855	0.81	+0.8
3,170,291	+		MIT1002_02855	0.81	-1.7
3,170,319	+		MIT1002_02855	0.83	+1.4
3,170,319	+		MIT1002_02855	0.83	+1.2
3,170,371	+		MIT1002_02855	0.88	+3.7