Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02833

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,139,639	+				-2.0
3,139,654	+				-3.0
3,139,654	+				-0.1
3,139,662	-		MIT1002_02832	0.10	-0.7
3,139,673	+		MIT1002_02832	0.12	-1.0
3,139,740	-		MIT1002_02832	0.19	-2.3
3,139,740	-		MIT1002_02832	0.19	-2.0
3,139,750	-		MIT1002_02832	0.20	-1.5
3,139,770	+		MIT1002_02832	0.22	-3.5
3,139,788	+		MIT1002_02832	0.24	-1.6
3,139,807	+		MIT1002_02832	0.26	-3.8
3,139,807	+		MIT1002_02832	0.26	-2.7
3,139,815	-		MIT1002_02832	0.27	-2.5
3,139,815	-		MIT1002_02832	0.27	-0.4
3,139,815	-		MIT1002_02832	0.27	-3.2
3,139,882	-		MIT1002_02832	0.34	+0.9
3,139,936	+		MIT1002_02832	0.39	-1.3
3,139,991	+		MIT1002_02832	0.45	-3.6
3,139,991	+		MIT1002_02832	0.45	-0.4
3,140,183	-		MIT1002_02832	0.66	-1.6
3,140,229	-		MIT1002_02832	0.70	+0.3
3,140,281	+		MIT1002_02832	0.76	-1.9
3,140,367	-		MIT1002_02832	0.85	-1.5
3,140,374	+		MIT1002_02832	0.86	-3.0
3,140,375	-		MIT1002_02832	0.86	-1.9
3,140,427	+				-2.6
3,140,430	-				-3.5
3,140,448	+				-0.6
3,140,566	+				-4.9
3,140,567	-				-2.2
3,140,574	-				-3.1
3,140,639	-				+0.6
3,140,780	-				-6.8
3,140,873	+		MIT1002_02833	0.12	-1.4
3,140,934	+		MIT1002_02833	0.15	-0.7
3,141,025	+		MIT1002_02833	0.19	-3.1
3,141,038	-		MIT1002_02833	0.20	-2.1
3,141,038	-		MIT1002_02833	0.20	-0.7
3,141,175	+		MIT1002_02833	0.26	-2.9
3,141,178	-		MIT1002_02833	0.26	-2.0
3,141,207	+		MIT1002_02833	0.27	-4.2
3,141,281	+		MIT1002_02833	0.31	-5.3
3,141,290	-		MIT1002_02833	0.31	-1.6
3,141,346	-		MIT1002_02833	0.34	-4.2
3,141,358	-		MIT1002_02833	0.34	-3.6
3,141,393	-		MIT1002_02833	0.36	-1.5
3,141,415	-		MIT1002_02833	0.37	-3.6
3,141,474	+		MIT1002_02833	0.40	-4.6
3,141,474	+		MIT1002_02833	0.40	-2.4
3,141,501	+		MIT1002_02833	0.41	+0.6
3,141,542	+		MIT1002_02833	0.43	-4.3
3,141,575	-		MIT1002_02833	0.44	-4.2
3,141,614	-		MIT1002_02833	0.46	-5.7
3,141,655	+		MIT1002_02833	0.48	-0.9
3,141,695	-		MIT1002_02833	0.50	-7.6
3,141,717	+		MIT1002_02833	0.51	-7.3
3,141,846	-		MIT1002_02833	0.56	-3.3
3,141,858	-		MIT1002_02833	0.57	-2.3
3,141,858	-		MIT1002_02833	0.57	-2.1
3,142,010	-		MIT1002_02833	0.64	-1.1
3,142,031	-		MIT1002_02833	0.65	-0.7
3,142,078	+		MIT1002_02833	0.67	-2.6
3,142,078	+		MIT1002_02833	0.67	-2.7
3,142,086	-		MIT1002_02833	0.67	-4.4
3,142,086	-		MIT1002_02833	0.67	-1.0
3,142,086	-		MIT1002_02833	0.67	-2.8
3,142,210	+		MIT1002_02833	0.73	-2.9
3,142,210	+		MIT1002_02833	0.73	-3.4
3,142,210	+		MIT1002_02833	0.73	-1.7
3,142,222	+		MIT1002_02833	0.74	-4.8
3,142,230	-		MIT1002_02833	0.74	-1.2
3,142,284	+		MIT1002_02833	0.76	-3.8
3,142,371	+		MIT1002_02833	0.80	-3.3
3,142,379	-		MIT1002_02833	0.81	-2.5
3,142,449	+		MIT1002_02833	0.84	-3.5
3,142,457	-		MIT1002_02833	0.84	-0.1
3,142,460	+		MIT1002_02833	0.84	-3.9
3,142,460	+		MIT1002_02833	0.84	-0.7
3,142,460	+		MIT1002_02833	0.84	-0.9
3,142,460	+		MIT1002_02833	0.84	-3.2
3,142,460	+		MIT1002_02833	0.84	-2.3
3,142,460	+		MIT1002_02833	0.84	-0.8
3,142,460	+		MIT1002_02833	0.84	-4.6
3,142,460	+		MIT1002_02833	0.84	+0.3
3,142,460	+		MIT1002_02833	0.84	-4.4
3,142,460	+		MIT1002_02833	0.84	-2.7
3,142,460	+		MIT1002_02833	0.84	-2.0
3,142,460	+		MIT1002_02833	0.84	-3.4
3,142,468	-		MIT1002_02833	0.85	-3.7
3,142,468	-		MIT1002_02833	0.85	-0.6
3,142,468	-		MIT1002_02833	0.85	-6.5
3,142,468	-		MIT1002_02833	0.85	-2.8
3,142,468	-		MIT1002_02833	0.85	-2.7
3,142,468	-		MIT1002_02833	0.85	-2.4
3,142,468	-		MIT1002_02833	0.85	-3.9
3,142,468	-		MIT1002_02833	0.85	-4.1
3,142,468	-		MIT1002_02833	0.85	-1.9
3,142,468	-		MIT1002_02833	0.85	-1.3
3,142,468	-		MIT1002_02833	0.85	-1.5
3,142,468	-		MIT1002_02833	0.85	-3.8
3,142,468	-		MIT1002_02833	0.85	-2.7
3,142,505	+		MIT1002_02833	0.86	-1.2
3,142,575	+		MIT1002_02833	0.90	-4.2
3,142,575	+		MIT1002_02833	0.90	-2.8
3,142,583	-				-2.5
3,142,655	-				-3.3
3,142,675	-				-2.8
3,142,748	+				-0.1
3,142,748	+				-3.0
3,142,848	-				-0.3
3,142,880	+				-1.2
3,142,890	+				+0.5
3,142,918	-				-0.1
3,142,965	-				+0.5
3,143,002	-				-1.9
3,143,029	-				+1.0
3,143,126	+				-1.6
3,143,134	-				+1.8
3,143,168	+				-0.9
3,143,267	+				-2.0
3,143,309	+		MIT1002_02834	0.12	-1.8
3,143,317	-		MIT1002_02834	0.13	+1.6
3,143,324	+		MIT1002_02834	0.14	-0.3
3,143,366	-		MIT1002_02834	0.19	-0.3
3,143,396	+		MIT1002_02834	0.22	-1.5
3,143,404	-		MIT1002_02834	0.23	-0.0
3,143,404	-		MIT1002_02834	0.23	+0.9
3,143,404	-		MIT1002_02834	0.23	-2.4
3,143,555	-		MIT1002_02834	0.40	-0.6
3,143,577	-		MIT1002_02834	0.43	-0.0
3,143,589	+		MIT1002_02834	0.44	+0.8
3,143,605	+		MIT1002_02834	0.46	+0.8
3,143,656	-		MIT1002_02834	0.52	+2.4
3,143,658	+		MIT1002_02834	0.52	+0.2
3,143,660	+		MIT1002_02834	0.52	-1.1
3,143,665	+		MIT1002_02834	0.53	+0.5
3,143,665	+		MIT1002_02834	0.53	+2.1
3,143,666	-		MIT1002_02834	0.53	-0.7
3,143,688	-		MIT1002_02834	0.55	-1.6
3,143,726	-		MIT1002_02834	0.60	-0.1
3,143,728	+		MIT1002_02834	0.60	+0.4
3,143,728	+		MIT1002_02834	0.60	-1.6
3,143,736	-		MIT1002_02834	0.61	-1.4
3,143,736	-		MIT1002_02834	0.61	-0.1