Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02789

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,093,236	+		MIT1002_02789	0.15	-0.7
3,093,244	-		MIT1002_02789	0.15	+0.8
3,093,272	+		MIT1002_02789	0.18	+1.0
3,093,291	-		MIT1002_02789	0.20	-0.3
3,093,328	+		MIT1002_02789	0.24	+1.0
3,093,336	-		MIT1002_02789	0.24	-0.4
3,093,347	+		MIT1002_02789	0.25	-0.5
3,093,367	+		MIT1002_02789	0.27	-0.2
3,093,419	+		MIT1002_02789	0.32	-0.8
3,093,424	+		MIT1002_02789	0.33	-0.5
3,093,430	-		MIT1002_02789	0.33	-0.3
3,093,540	-		MIT1002_02789	0.44	-1.3
3,093,559	+		MIT1002_02789	0.46	+1.4
3,093,567	-		MIT1002_02789	0.47	-0.1
3,093,695	+		MIT1002_02789	0.59	-3.2
3,093,708	+		MIT1002_02789	0.60	+0.3
3,093,765	+		MIT1002_02789	0.66	-2.6
3,094,060	-				+0.4
3,094,118	+				-0.9
3,094,118	+				+0.9
3,094,126	-				-1.9
3,094,151	+				-2.2
3,094,154	-				-0.5
3,094,159	-				+0.2
3,094,356	-		MIT1002_02790	0.19	+1.3
3,094,398	+		MIT1002_02790	0.23	-0.3
3,094,401	-		MIT1002_02790	0.23	-0.1
3,094,527	-		MIT1002_02790	0.34	+0.1
3,094,533	+		MIT1002_02790	0.34	+0.9
3,094,553	+		MIT1002_02790	0.36	+0.6
3,094,617	-		MIT1002_02790	0.41	+0.2
3,094,617	-		MIT1002_02790	0.41	-1.8
3,094,737	+		MIT1002_02790	0.51	-0.8
3,094,747	+		MIT1002_02790	0.52	-0.8
3,094,755	-		MIT1002_02790	0.53	-0.1
3,094,761	+		MIT1002_02790	0.53	+1.0
3,094,767	+		MIT1002_02790	0.54	+0.2
3,094,774	+		MIT1002_02790	0.54	-2.5
3,094,796	+		MIT1002_02790	0.56	-1.8
3,094,891	+		MIT1002_02790	0.64	-3.1
3,094,899	-		MIT1002_02790	0.65	+1.4
3,095,025	+		MIT1002_02790	0.75	-1.3
3,095,028	-		MIT1002_02790	0.76	-1.6
3,095,033	-		MIT1002_02790	0.76	-0.1