Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02708

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
3,010,451	-		MIT1002_02707	0.69	+0.2
3,010,525	-		MIT1002_02707	0.72	-1.4
3,010,551	-		MIT1002_02707	0.73	-2.8
3,010,639	-		MIT1002_02707	0.77	+0.1
3,010,670	-		MIT1002_02707	0.78	-2.1
3,010,670	-		MIT1002_02707	0.78	-1.1
3,010,677	-		MIT1002_02707	0.78	-1.7
3,010,705	-		MIT1002_02707	0.79	-0.0
3,010,782	-		MIT1002_02707	0.82	+0.8
3,010,882	+		MIT1002_02707	0.86	+2.3
3,010,957	-		MIT1002_02707	0.89	-0.1
3,011,069	+				+0.7
3,011,094	+				-0.2
3,011,094	+				+0.8
3,011,151	+				+0.2
3,011,151	+				+0.3
3,011,159	-				-0.5
3,011,212	-				-0.6
3,011,276	-				+1.1
3,011,331	-				+0.7
3,011,343	+				+0.9
3,011,474	-				-4.9
3,011,508	+		MIT1002_02708	0.10	-2.8
3,011,609	-		MIT1002_02708	0.20	-3.7
3,011,709	+		MIT1002_02708	0.30	-2.3
3,011,740	+		MIT1002_02708	0.33	-0.4
3,011,740	+		MIT1002_02708	0.33	-3.1
3,011,748	-		MIT1002_02708	0.34	-2.2
3,011,872	+		MIT1002_02708	0.46	-4.0
3,011,922	+		MIT1002_02708	0.51	-0.1
3,011,952	-		MIT1002_02708	0.54	-1.0
3,011,997	+		MIT1002_02708	0.59	-1.6
3,012,005	-		MIT1002_02708	0.59	-1.3
3,012,010	-		MIT1002_02708	0.60	-1.0
3,012,061	-		MIT1002_02708	0.65	-0.9
3,012,072	+		MIT1002_02708	0.66	-3.0
3,012,092	+		MIT1002_02708	0.68	-3.2
3,012,102	+		MIT1002_02708	0.69	-1.3
3,012,102	+		MIT1002_02708	0.69	-3.6
3,012,110	-		MIT1002_02708	0.70	-2.9
3,012,110	-		MIT1002_02708	0.70	-2.3
3,012,125	-		MIT1002_02708	0.71	+0.6
3,012,200	-		MIT1002_02708	0.79	-1.1
3,012,209	-		MIT1002_02708	0.80	-4.0
3,012,209	-		MIT1002_02708	0.80	-2.5
3,012,244	-		MIT1002_02708	0.83	-0.9
3,012,250	+		MIT1002_02708	0.84	-2.6
3,012,258	-		MIT1002_02708	0.84	-2.5
3,012,271	+		MIT1002_02708	0.86	-2.6
3,012,326	-				-3.4
3,012,419	-				-1.6
3,012,421	+				-4.2
3,012,421	+				-2.7
3,012,539	+				+1.5
3,012,586	-		MIT1002_02709	0.11	+2.0
3,012,588	+		MIT1002_02709	0.12	-0.4
3,012,588	+		MIT1002_02709	0.12	-0.3
3,012,588	+		MIT1002_02709	0.12	+0.1
3,012,596	-		MIT1002_02709	0.13	+0.5
3,012,596	-		MIT1002_02709	0.13	+1.0
3,012,596	-		MIT1002_02709	0.13	-1.1
3,012,610	+		MIT1002_02709	0.15	-0.2
3,012,612	+		MIT1002_02709	0.15	+2.4
3,012,618	-		MIT1002_02709	0.16	+1.0
3,012,618	-		MIT1002_02709	0.16	+1.3
3,012,620	-		MIT1002_02709	0.16	+1.8
3,012,690	-		MIT1002_02709	0.26	+1.4
3,012,690	-		MIT1002_02709	0.26	+2.1
3,012,703	+		MIT1002_02709	0.28	+1.7
3,012,708	+		MIT1002_02709	0.28	-0.5
3,012,716	-		MIT1002_02709	0.30	+0.2
3,012,718	+		MIT1002_02709	0.30	+1.4
3,012,726	-		MIT1002_02709	0.31	+1.1
3,012,817	-		MIT1002_02709	0.44	+0.6
3,012,903	+		MIT1002_02709	0.56	+0.1
3,012,940	+		MIT1002_02709	0.61	-0.7
3,012,967	+		MIT1002_02709	0.65	+3.1
3,012,967	+		MIT1002_02709	0.65	-0.5
3,012,975	-		MIT1002_02709	0.66	+0.4
3,012,975	-		MIT1002_02709	0.66	-1.5
3,012,975	-		MIT1002_02709	0.66	+0.3
3,013,046	+		MIT1002_02709	0.76	+0.9
3,013,056	+		MIT1002_02709	0.77	+0.3
3,013,056	+		MIT1002_02709	0.77	+0.0
3,013,056	+		MIT1002_02709	0.77	-1.0
3,013,056	+		MIT1002_02709	0.77	-1.2
3,013,056	+		MIT1002_02709	0.77	-1.1
3,013,056	+		MIT1002_02709	0.77	+0.6
3,013,064	-		MIT1002_02709	0.78	-1.1
3,013,064	-		MIT1002_02709	0.78	-2.2
3,013,064	-		MIT1002_02709	0.78	+0.6
3,013,064	-		MIT1002_02709	0.78	+1.7
3,013,066	-		MIT1002_02709	0.78	-1.1
3,013,081	-		MIT1002_02709	0.80	+0.7
3,013,143	-		MIT1002_02709	0.89	+0.6
3,013,154	-				+1.6
3,013,214	+				-2.2
3,013,222	-				+1.2
3,013,274	+				+1.1
3,013,300	-				+0.9