Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02573

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,871,062	-		MIT1002_02571	0.86	+0.4
2,871,076	+		MIT1002_02571	0.87	+0.0
2,871,078	+		MIT1002_02571	0.88	+0.6
2,871,084	-		MIT1002_02571	0.88	-3.0
2,871,086	-		MIT1002_02571	0.88	-1.1
2,871,086	-		MIT1002_02571	0.88	-1.7
2,871,086	-		MIT1002_02571	0.88	-0.5
2,871,137	+				-0.7
2,871,154	+				-1.5
2,871,154	-				-1.0
2,871,258	+				+0.7
2,871,265	-				+1.7
2,871,277	+				-1.4
2,871,277	+				-1.6
2,871,277	+				+1.2
2,871,291	+				+0.4
2,871,299	-				-1.3
2,871,301	-				+1.9
2,871,363	+		MIT1002_02572	0.14	-0.6
2,871,363	+		MIT1002_02572	0.14	-0.2
2,871,366	-		MIT1002_02572	0.15	-2.9
2,871,371	-		MIT1002_02572	0.15	+0.5
2,871,371	-		MIT1002_02572	0.15	+2.1
2,871,371	-		MIT1002_02572	0.15	-1.9
2,871,371	-		MIT1002_02572	0.15	-1.6
2,871,375	+		MIT1002_02572	0.16	-0.4
2,871,417	+		MIT1002_02572	0.22	-1.8
2,871,425	-		MIT1002_02572	0.24	-1.8
2,871,602	-		MIT1002_02572	0.50	-3.8
2,871,671	-		MIT1002_02572	0.61	-2.7
2,871,729	+		MIT1002_02572	0.69	-0.3
2,871,793	+		MIT1002_02572	0.79	-1.8
2,871,801	-		MIT1002_02572	0.80	-0.2
2,871,801	-		MIT1002_02572	0.80	-1.4
2,871,830	+		MIT1002_02572	0.84	-0.7
2,871,830	+		MIT1002_02572	0.84	-2.4
2,871,890	+				-0.9
2,871,903	-				-2.5
2,872,037	+				+0.2
2,872,058	+				-1.7
2,872,089	-				+0.5
2,872,112	+		MIT1002_02573	0.10	+0.0
2,872,114	+		MIT1002_02573	0.10	-2.5
2,872,133	+		MIT1002_02573	0.12	-3.7
2,872,180	+		MIT1002_02573	0.16	-1.9
2,872,265	-		MIT1002_02573	0.23	-0.2
2,872,291	+		MIT1002_02573	0.25	-0.2
2,872,309	-		MIT1002_02573	0.26	-0.6
2,872,309	-		MIT1002_02573	0.26	+0.8
2,872,543	+		MIT1002_02573	0.46	-4.2
2,872,580	-		MIT1002_02573	0.49	+0.8
2,872,598	+		MIT1002_02573	0.50	-1.5
2,872,608	+		MIT1002_02573	0.51	-2.0
2,872,759	+		MIT1002_02573	0.64	-0.6
2,872,844	+		MIT1002_02573	0.71	-2.0
2,872,866	-		MIT1002_02573	0.72	-2.7
2,872,866	-		MIT1002_02573	0.72	-1.4
2,872,876	+		MIT1002_02573	0.73	-4.2
2,872,944	-		MIT1002_02573	0.79	-1.3
2,872,974	+		MIT1002_02573	0.81	-0.8
2,872,976	+		MIT1002_02573	0.82	-1.0
2,872,981	+		MIT1002_02573	0.82	-1.0
2,872,984	-		MIT1002_02573	0.82	-0.8
2,872,984	-		MIT1002_02573	0.82	-2.1
2,872,989	-		MIT1002_02573	0.83	+0.5
2,873,080	-				-2.7
2,873,144	-				-2.0
2,873,159	-				-1.6
2,873,159	-				-0.4
2,873,296	+				-1.0
2,873,351	+				+0.1
2,873,444	+				+1.6
2,873,452	-				+0.3
2,873,452	-				-0.5
2,873,578	+				+0.5
2,873,586	-				-1.3
2,873,591	-				-1.1
2,873,609	+				-1.9
2,873,681	+				-0.1
2,873,722	-				-0.3
2,873,722	-				-0.3
2,873,724	+				+0.2
2,873,754	+				-0.0
2,873,831	+		MIT1002_02574	0.15	+0.2
2,873,835	-		MIT1002_02574	0.15	-1.1
2,873,850	+		MIT1002_02574	0.16	+1.0
2,873,891	+		MIT1002_02574	0.19	-0.6
2,873,900	+		MIT1002_02574	0.20	+1.3
2,873,908	-		MIT1002_02574	0.20	-0.8
2,874,059	+		MIT1002_02574	0.31	+0.8
2,874,059	+		MIT1002_02574	0.31	-0.7
2,874,075	+		MIT1002_02574	0.32	-1.4
2,874,075	+		MIT1002_02574	0.32	-2.1
2,874,083	-		MIT1002_02574	0.32	+0.0
2,874,101	+		MIT1002_02574	0.33	-1.3
2,874,144	-		MIT1002_02574	0.36	+1.8
2,874,167	-		MIT1002_02574	0.38	+0.4
2,874,177	+		MIT1002_02574	0.39	+0.2
2,874,182	+		MIT1002_02574	0.39	-1.4