Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02429

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,711,076	+		MIT1002_02428	0.39	-1.5
2,711,089	-		MIT1002_02428	0.40	+1.2
2,711,101	+		MIT1002_02428	0.40	-0.3
2,711,109	-		MIT1002_02428	0.41	-0.6
2,711,109	-		MIT1002_02428	0.41	+0.3
2,711,142	+		MIT1002_02428	0.44	+0.0
2,711,144	-		MIT1002_02428	0.44	-0.5
2,711,187	-		MIT1002_02428	0.47	-3.8
2,711,311	-		MIT1002_02428	0.57	+3.4
2,711,326	+		MIT1002_02428	0.58	-0.5
2,711,326	+		MIT1002_02428	0.58	-0.4
2,711,334	-		MIT1002_02428	0.58	+0.5
2,711,421	+		MIT1002_02428	0.65	+1.8
2,711,429	-		MIT1002_02428	0.66	+0.6
2,711,684	-		MIT1002_02428	0.85	-1.8
2,711,836	+				-0.8
2,711,842	-				+0.6
2,711,844	-				+0.2
2,711,844	-				-2.2
2,711,898	+				+0.4
2,711,906	-				+1.0
2,711,907	-				-1.8
2,711,991	+				-0.4
2,711,997	-				-3.6
2,712,119	-				-2.4
2,712,215	+		MIT1002_02429	0.19	-5.5
2,712,231	+		MIT1002_02429	0.21	-4.8
2,712,246	-		MIT1002_02429	0.22	-1.9
2,712,266	-		MIT1002_02429	0.24	+0.5
2,712,300	-		MIT1002_02429	0.28	-5.4
2,712,304	+		MIT1002_02429	0.28	-2.1
2,712,312	+		MIT1002_02429	0.29	-4.3
2,712,312	+		MIT1002_02429	0.29	-4.8
2,712,312	+		MIT1002_02429	0.29	-3.0
2,712,312	+		MIT1002_02429	0.29	-3.2
2,712,312	-		MIT1002_02429	0.29	-2.9
2,712,320	-		MIT1002_02429	0.30	-1.7
2,712,348	-		MIT1002_02429	0.32	-3.7
2,712,594	+		MIT1002_02429	0.57	-2.5
2,712,594	+		MIT1002_02429	0.57	-0.2
2,712,610	-		MIT1002_02429	0.58	-4.4
2,712,623	+		MIT1002_02429	0.59	-2.0
2,712,661	+		MIT1002_02429	0.63	-2.0
2,712,661	+		MIT1002_02429	0.63	-1.5
2,712,671	+		MIT1002_02429	0.64	-2.2
2,712,671	+		MIT1002_02429	0.64	-2.8
2,712,679	-		MIT1002_02429	0.65	-2.3
2,712,880	-		MIT1002_02429	0.85	-2.5
2,712,886	-		MIT1002_02429	0.85	-2.8
2,712,893	-		MIT1002_02429	0.86	-3.3
2,712,901	-		MIT1002_02429	0.87	-3.4
2,712,959	-				-3.7
2,712,967	-				-2.2
2,712,967	-				-4.0
2,712,990	+				-3.1
2,712,998	-				-0.5
2,713,250	+				-0.1
2,713,296	+				-1.2
2,713,314	-				-0.4
2,713,353	+				-0.4
2,713,487	+		MIT1002_02430	0.16	+0.5
2,713,532	+		MIT1002_02430	0.19	-2.8
2,713,569	+		MIT1002_02430	0.22	-2.2
2,713,600	+		MIT1002_02430	0.24	+1.9
2,713,641	+		MIT1002_02430	0.27	+1.0
2,713,641	+		MIT1002_02430	0.27	+0.2
2,713,649	-		MIT1002_02430	0.27	+0.3
2,713,734	-		MIT1002_02430	0.33	+2.0
2,713,734	-		MIT1002_02430	0.33	+1.5
2,713,747	+		MIT1002_02430	0.34	-2.0
2,713,752	+		MIT1002_02430	0.34	-1.9
2,713,785	+		MIT1002_02430	0.36	-2.8
2,713,785	+		MIT1002_02430	0.36	-1.5
2,713,785	+		MIT1002_02430	0.36	-1.5
2,713,785	+		MIT1002_02430	0.36	+0.3
2,713,785	+		MIT1002_02430	0.36	-1.4
2,713,793	-		MIT1002_02430	0.37	-0.6
2,713,808	+		MIT1002_02430	0.38	+1.8
2,713,809	-		MIT1002_02430	0.38	+2.8
2,713,824	+		MIT1002_02430	0.39	-0.1
2,713,832	-		MIT1002_02430	0.39	+2.4
2,713,832	-		MIT1002_02430	0.39	+0.5
2,713,955	-		MIT1002_02430	0.48	-0.4
2,713,983	-		MIT1002_02430	0.49	+0.5
2,713,993	+		MIT1002_02430	0.50	-0.9