Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02393

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,667,850	+		MIT1002_02392	0.49	+0.7
2,667,857	+		MIT1002_02392	0.49	-2.2
2,667,857	+		MIT1002_02392	0.49	-0.5
2,667,858	-		MIT1002_02392	0.49	-0.4
2,667,865	-		MIT1002_02392	0.49	-0.7
2,667,909	+		MIT1002_02392	0.52	-2.0
2,667,917	-		MIT1002_02392	0.53	+0.6
2,667,924	+		MIT1002_02392	0.53	+0.8
2,667,954	+		MIT1002_02392	0.55	+1.0
2,668,101	-		MIT1002_02392	0.64	-0.6
2,668,171	+		MIT1002_02392	0.68	+1.0
2,668,221	+		MIT1002_02392	0.71	-1.3
2,668,277	-		MIT1002_02392	0.74	-2.4
2,668,308	+		MIT1002_02392	0.76	+0.6
2,668,457	-		MIT1002_02392	0.85	-1.0
2,668,473	+		MIT1002_02392	0.86	-2.6
2,668,473	+		MIT1002_02392	0.86	-0.4
2,668,473	+		MIT1002_02392	0.86	-1.2
2,668,473	+		MIT1002_02392	0.86	-1.1
2,668,481	-		MIT1002_02392	0.87	-1.6
2,668,481	-		MIT1002_02392	0.87	+0.9
2,668,481	-		MIT1002_02392	0.87	-1.3
2,668,481	-		MIT1002_02392	0.87	-2.1
2,668,481	-		MIT1002_02392	0.87	-1.1
2,668,481	-		MIT1002_02392	0.87	-1.0
2,668,481	-		MIT1002_02392	0.87	-0.5
2,668,481	-		MIT1002_02392	0.87	-2.5
2,668,627	+				-1.7
2,668,630	-				+1.0
2,668,673	-				-0.2
2,668,696	-				-2.3
2,668,887	+				+0.3
2,668,887	+				+1.2
2,668,892	+				+0.7
2,668,895	-				+0.7
2,669,006	+		MIT1002_02393	0.17	-0.4
2,669,006	+		MIT1002_02393	0.17	-1.8
2,669,014	-		MIT1002_02393	0.18	-1.4
2,669,014	-		MIT1002_02393	0.18	-1.0
2,669,019	-		MIT1002_02393	0.18	+1.0
2,669,019	-		MIT1002_02393	0.18	-0.5
2,669,140	-		MIT1002_02393	0.29	-0.4
2,669,165	+		MIT1002_02393	0.31	-0.4
2,669,215	+		MIT1002_02393	0.35	-1.8
2,669,258	+		MIT1002_02393	0.39	+0.3
2,669,282	-		MIT1002_02393	0.41	+2.7
2,669,293	+		MIT1002_02393	0.42	-0.2
2,669,294	-		MIT1002_02393	0.42	-2.0
2,669,309	-		MIT1002_02393	0.44	+0.5
2,669,345	-		MIT1002_02393	0.47	-0.1
2,669,349	+		MIT1002_02393	0.47	-0.2
2,669,410	-		MIT1002_02393	0.52	-1.7
2,669,430	+		MIT1002_02393	0.54	-0.5
2,669,438	-		MIT1002_02393	0.55	-1.0
2,669,445	-		MIT1002_02393	0.56	+0.7
2,669,445	-		MIT1002_02393	0.56	+0.1
2,669,454	+		MIT1002_02393	0.56	-2.1
2,669,567	+		MIT1002_02393	0.66	-1.0
2,669,575	-		MIT1002_02393	0.67	-2.2
2,669,577	-		MIT1002_02393	0.67	-0.5
2,669,641	+		MIT1002_02393	0.73	-0.3
2,669,641	+		MIT1002_02393	0.73	+1.1
2,669,641	+		MIT1002_02393	0.73	-0.1
2,669,651	+		MIT1002_02393	0.74	-1.0
2,669,651	+		MIT1002_02393	0.74	-0.1
2,669,651	+		MIT1002_02393	0.74	-1.3
2,669,651	+		MIT1002_02393	0.74	-3.1
2,669,651	+		MIT1002_02393	0.74	-0.6
2,669,651	+		MIT1002_02393	0.74	+1.5
2,669,651	+		MIT1002_02393	0.74	-1.6
2,669,651	+		MIT1002_02393	0.74	+0.2
2,669,651	+		MIT1002_02393	0.74	+0.4
2,669,651	+		MIT1002_02393	0.74	-2.3
2,669,651	+		MIT1002_02393	0.74	-1.0
2,669,659	-		MIT1002_02393	0.74	-0.3
2,669,659	-		MIT1002_02393	0.74	-0.7
2,669,659	-		MIT1002_02393	0.74	+0.1
2,669,659	-		MIT1002_02393	0.74	-0.2
2,669,659	-		MIT1002_02393	0.74	+0.8
2,669,659	-		MIT1002_02393	0.74	+2.2
2,669,659	-		MIT1002_02393	0.74	+0.0
2,669,659	-		MIT1002_02393	0.74	+3.1
2,669,659	-		MIT1002_02393	0.74	+1.8
2,669,659	-		MIT1002_02393	0.74	-1.7
2,669,677	-		MIT1002_02393	0.76	+1.0
2,669,721	+		MIT1002_02393	0.80	-0.9
2,669,748	+		MIT1002_02393	0.82	+1.4
2,669,887	-				-0.9
2,669,907	+				-1.0
2,669,919	-				-1.1
2,669,919	-				-1.0
2,670,025	+				-0.4
2,670,156	+				+0.7
2,670,164	-				-1.9
2,670,269	-		MIT1002_02394	0.10	-1.1
2,670,397	+		MIT1002_02394	0.19	-0.1
2,670,397	-		MIT1002_02394	0.19	-2.8
2,670,435	+		MIT1002_02394	0.22	-1.2
2,670,532	+		MIT1002_02394	0.28	-0.1
2,670,539	+		MIT1002_02394	0.29	-2.7
2,670,547	-		MIT1002_02394	0.30	-1.4
2,670,547	-		MIT1002_02394	0.30	-1.3
2,670,565	+		MIT1002_02394	0.31	-2.2
2,670,601	+		MIT1002_02394	0.33	-0.7
2,670,609	-		MIT1002_02394	0.34	-3.0
2,670,624	-		MIT1002_02394	0.35	-2.9
2,670,624	-		MIT1002_02394	0.35	-3.2
2,670,624	-		MIT1002_02394	0.35	-1.7
2,670,668	-		MIT1002_02394	0.38	-4.0
2,670,769	+		MIT1002_02394	0.45	-1.3
2,670,775	-		MIT1002_02394	0.45	-2.6
2,670,812	-		MIT1002_02394	0.48	-1.5
2,670,813	-		MIT1002_02394	0.48	-3.2
2,670,824	+		MIT1002_02394	0.49	-0.6
2,670,832	-		MIT1002_02394	0.49	-0.6
2,670,895	+		MIT1002_02394	0.54	-0.4