Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02348

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,614,952	+				+0.2
2,615,029	-				-2.2
2,615,029	-				+0.4
2,615,171	+				-0.6
2,615,182	-				+0.9
2,615,249	-				+0.7
2,615,249	-				-0.2
2,615,273	+				+1.5
2,615,298	+				+0.2
2,615,298	+				+0.3
2,615,298	+				-0.3
2,615,390	-				-0.6
2,615,451	-		MIT1002_02347	0.27	-1.8
2,615,577	-		MIT1002_02347	0.74	-2.6
2,615,577	-		MIT1002_02347	0.74	-1.6
2,615,764	+				+1.3
2,615,772	-				+1.1
2,615,792	-				-0.8
2,616,023	+				-3.4
2,616,049	+		MIT1002_02348	0.12	-3.1
2,616,087	-		MIT1002_02348	0.16	-1.6
2,616,087	-		MIT1002_02348	0.16	+0.2
2,616,136	+		MIT1002_02348	0.21	-4.8
2,616,184	-		MIT1002_02348	0.26	-3.2
2,616,195	+		MIT1002_02348	0.27	-7.5
2,616,203	-		MIT1002_02348	0.27	-1.8
2,616,203	-		MIT1002_02348	0.27	-5.4
2,616,269	-		MIT1002_02348	0.34	-4.1
2,616,559	-		MIT1002_02348	0.64	-1.8
2,616,603	+		MIT1002_02348	0.68	-4.0
2,616,608	+		MIT1002_02348	0.68	-4.6
2,616,608	+		MIT1002_02348	0.68	-4.5
2,616,608	+		MIT1002_02348	0.68	-3.1
2,616,608	+		MIT1002_02348	0.68	-2.4
2,616,680	+		MIT1002_02348	0.76	-1.4
2,616,690	+		MIT1002_02348	0.77	-2.0
2,616,698	-		MIT1002_02348	0.78	-0.0
2,616,738	+		MIT1002_02348	0.82	-1.8
2,616,747	-		MIT1002_02348	0.83	-3.5
2,616,748	+		MIT1002_02348	0.83	-3.5
2,616,748	+		MIT1002_02348	0.83	-4.1
2,616,748	+		MIT1002_02348	0.83	-3.2
2,616,748	+		MIT1002_02348	0.83	-1.5
2,616,756	-		MIT1002_02348	0.83	-4.2
2,616,756	-		MIT1002_02348	0.83	-1.6
2,616,802	+		MIT1002_02348	0.88	-1.6
2,616,802	+		MIT1002_02348	0.88	-2.4
2,616,817	-		MIT1002_02348	0.90	-3.5
2,616,841	-				-0.9
2,616,843	+				-3.7
2,616,849	+				-5.1
2,616,851	-				-3.4
2,616,908	+				-1.3
2,616,916	-				-1.6
2,616,943	+				-1.1
2,616,977	+				+2.6
2,616,982	+				-0.2
2,616,990	-				-1.2
2,616,991	+				+0.8
2,616,991	+				-0.8
2,617,001	+				-1.2
2,617,023	+				-1.6
2,617,058	+				-5.0
2,617,071	-				-2.5
2,617,096	+				+0.4
2,617,096	+				-3.6
2,617,096	+				-2.6
2,617,104	-				-2.9
2,617,106	+				-2.0
2,617,106	+				-3.2
2,617,106	+				-3.2
2,617,106	+				+0.2
2,617,106	+				-3.3
2,617,106	+				-2.8
2,617,106	+				-2.4
2,617,106	+				-3.5
2,617,106	+				-3.3
2,617,106	+				-5.1
2,617,106	+				-1.1
2,617,106	+				-1.6
2,617,108	+				-2.2
2,617,114	-				-2.3
2,617,114	-				-6.1
2,617,114	-				-2.5
2,617,114	-				-2.3
2,617,114	-				-3.0
2,617,122	-				-1.5
2,617,141	+				-1.6
2,617,206	+		MIT1002_02349	0.16	-1.2
2,617,214	-		MIT1002_02349	0.16	-3.1
2,617,230	+		MIT1002_02349	0.18	-5.6
2,617,270	+		MIT1002_02349	0.22	-2.3
2,617,271	+		MIT1002_02349	0.22	-4.2
2,617,279	-		MIT1002_02349	0.23	-2.5
2,617,279	-		MIT1002_02349	0.23	-3.0
2,617,303	-		MIT1002_02349	0.25	-3.0
2,617,349	-		MIT1002_02349	0.29	-4.1
2,617,349	-		MIT1002_02349	0.29	-1.5
2,617,364	+		MIT1002_02349	0.31	-0.4
2,617,475	+		MIT1002_02349	0.41	-3.1
2,617,561	+		MIT1002_02349	0.50	-3.7
2,617,652	+		MIT1002_02349	0.58	-1.5
2,617,668	+		MIT1002_02349	0.60	-5.0
2,617,749	+		MIT1002_02349	0.68	-5.5
2,617,805	+		MIT1002_02349	0.73	-1.6
2,617,813	+		MIT1002_02349	0.74	-0.2
2,617,813	+		MIT1002_02349	0.74	-2.8
2,617,813	-		MIT1002_02349	0.74	-3.0
2,617,815	+		MIT1002_02349	0.74	-2.7
2,617,815	+		MIT1002_02349	0.74	-3.9
2,617,823	-		MIT1002_02349	0.75	-2.2
2,617,828	-		MIT1002_02349	0.75	-0.1
2,617,878	-		MIT1002_02349	0.80	-2.4