Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02312

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,578,060	+		MIT1002_02310	0.62	-0.4
2,578,060	+		MIT1002_02310	0.62	-0.7
2,578,075	+		MIT1002_02310	0.65	+3.6
2,578,075	+		MIT1002_02310	0.65	+0.4
2,578,075	+		MIT1002_02310	0.65	-1.1
2,578,078	-		MIT1002_02310	0.65	+2.0
2,578,078	-		MIT1002_02310	0.65	-0.1
2,578,083	-		MIT1002_02310	0.66	-0.6
2,578,083	-		MIT1002_02310	0.66	+2.0
2,578,134	+		MIT1002_02310	0.74	+1.1
2,578,142	+		MIT1002_02310	0.75	+1.5
2,578,142	-		MIT1002_02310	0.75	+0.0
2,578,377	+		MIT1002_02311	0.11	-1.9
2,578,385	-		MIT1002_02311	0.13	-1.8
2,578,470	-		MIT1002_02311	0.32	+0.7
2,578,513	+		MIT1002_02311	0.42	+0.2
2,578,513	+		MIT1002_02311	0.42	+0.0
2,578,521	-		MIT1002_02311	0.44	-1.7
2,578,521	-		MIT1002_02311	0.44	+1.2
2,578,521	-		MIT1002_02311	0.44	-0.2
2,578,533	+		MIT1002_02311	0.47	+0.3
2,578,638	-		MIT1002_02311	0.71	-2.2
2,578,649	+		MIT1002_02311	0.74	+0.8
2,578,650	-		MIT1002_02311	0.74	-0.0
2,578,657	+		MIT1002_02311	0.76	+0.8
2,578,703	-		MIT1002_02311	0.86	+0.3
2,578,766	+				+0.3
2,578,782	+				-0.8
2,578,808	+				+1.5
2,578,808	+				-1.0
2,578,808	+				+1.0
2,578,816	-				-2.4
2,579,030	-				-2.9
2,579,062	+				-0.5
2,579,088	-				-1.4
2,579,088	-				+2.0
2,579,132	+		MIT1002_02312	0.18	-0.8
2,579,140	-		MIT1002_02312	0.20	-0.5
2,579,296	+		MIT1002_02312	0.58	-3.4
2,579,301	+		MIT1002_02312	0.59	-1.2
2,579,311	+		MIT1002_02312	0.62	-0.8
2,579,311	-		MIT1002_02312	0.62	+0.6
2,579,319	-		MIT1002_02312	0.64	-0.3
2,579,319	-		MIT1002_02312	0.64	-0.3
2,579,373	+		MIT1002_02312	0.77	-0.4
2,579,391	-		MIT1002_02312	0.81	-0.3
2,579,405	-		MIT1002_02312	0.85	+0.1
2,579,405	-		MIT1002_02312	0.85	+0.3
2,579,415	-		MIT1002_02312	0.87	-0.9
2,579,450	+				+0.5
2,579,484	+				+0.4
2,579,492	-				-1.7
2,579,497	-				+0.5
2,579,516	+				+0.4
2,579,521	+				-1.2
2,579,529	-				-1.0
2,579,594	-				+1.0
2,579,596	-				+1.1
2,579,596	-				-4.0
2,579,596	-				+2.2
2,579,596	-				+0.2
2,579,596	-				+3.1
2,579,600	+				+0.4
2,579,686	-				-0.0
2,579,693	+				+0.6
2,579,718	+				-1.1
2,579,762	+				+0.5
2,579,800	-		MIT1002_02313	0.12	-0.1
2,579,870	-		MIT1002_02313	0.23	+0.1
2,579,928	-		MIT1002_02313	0.32	-1.2
2,580,034	+		MIT1002_02313	0.49	+0.0
2,580,034	+		MIT1002_02313	0.49	-0.1
2,580,034	+		MIT1002_02313	0.49	-0.7
2,580,037	-		MIT1002_02313	0.49	+0.9
2,580,037	-		MIT1002_02313	0.49	-0.9
2,580,042	-		MIT1002_02313	0.50	-0.4
2,580,047	-		MIT1002_02313	0.51	-0.4
2,580,056	+		MIT1002_02313	0.52	-0.7
2,580,086	+		MIT1002_02313	0.57	+1.1
2,580,131	-		MIT1002_02313	0.64	-0.3
2,580,225	+		MIT1002_02313	0.79	-1.4
2,580,266	-		MIT1002_02313	0.85	+0.6
2,580,338	+				+0.8
2,580,346	-				+1.5
2,580,346	-				-0.5
2,580,348	+				-0.0
2,580,380	+				+0.0
2,580,381	+				+0.2
2,580,389	-				-0.9
2,580,391	-				+0.2
2,580,452	-				+2.0