Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02306

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,572,188	-		MIT1002_02305	0.13	-3.0
2,572,260	+		MIT1002_02305	0.22	+0.1
2,572,271	+		MIT1002_02305	0.24	-0.4
2,572,271	+		MIT1002_02305	0.24	-2.9
2,572,271	+		MIT1002_02305	0.24	-0.4
2,572,279	-		MIT1002_02305	0.25	-0.8
2,572,279	-		MIT1002_02305	0.25	-1.9
2,572,279	-		MIT1002_02305	0.25	-0.2
2,572,279	-		MIT1002_02305	0.25	+0.3
2,572,330	-		MIT1002_02305	0.31	+0.8
2,572,377	-		MIT1002_02305	0.37	-0.3
2,572,377	-		MIT1002_02305	0.37	+1.5
2,572,499	+		MIT1002_02305	0.52	-1.0
2,572,547	-		MIT1002_02305	0.58	-0.4
2,572,547	-		MIT1002_02305	0.58	-1.3
2,572,602	-		MIT1002_02305	0.65	-1.4
2,572,606	+		MIT1002_02305	0.66	-0.4
2,572,663	-		MIT1002_02305	0.73	-0.6
2,572,691	-		MIT1002_02305	0.77	+0.8
2,572,830	-				-0.5
2,572,904	+				+0.2
2,572,912	-				+1.8
2,572,926	+				-0.2
2,573,203	+				-2.8
2,573,204	-				-1.0
2,573,245	-				-4.2
2,573,395	-		MIT1002_02306	0.20	-3.0
2,573,410	-		MIT1002_02306	0.21	-2.2
2,573,422	-		MIT1002_02306	0.22	-1.0
2,573,538	+		MIT1002_02306	0.32	-3.1
2,573,668	-		MIT1002_02306	0.43	-2.9
2,573,718	-		MIT1002_02306	0.47	-0.2
2,573,750	+		MIT1002_02306	0.49	+0.2
2,573,808	+		MIT1002_02306	0.54	-1.2
2,573,876	-		MIT1002_02306	0.60	-2.2
2,573,900	+		MIT1002_02306	0.62	-3.0
2,573,900	+		MIT1002_02306	0.62	-0.7
2,573,908	-		MIT1002_02306	0.62	-1.7
2,574,071	-		MIT1002_02306	0.76	-3.9
2,574,129	+		MIT1002_02306	0.80	-4.0
2,574,251	+				-3.3
2,574,259	-				-0.0
2,574,259	-				+0.2
2,574,259	-				-3.9
2,574,315	-				-3.5
2,574,317	-				-1.1
2,574,319	+				+0.8
2,574,319	+				-4.1
2,574,350	+				-0.4
2,574,350	+				+0.8
2,574,371	-				+0.5
2,574,406	-				-0.1
2,574,474	+		MIT1002_02307	0.17	-0.8
2,574,474	-		MIT1002_02307	0.17	-1.7
2,574,537	+		MIT1002_02307	0.28	-0.2
2,574,590	-		MIT1002_02307	0.36	+1.0
2,574,602	+		MIT1002_02307	0.39	-0.8
2,574,604	+		MIT1002_02307	0.39	+0.4
2,574,612	-		MIT1002_02307	0.40	+0.4
2,574,625	+		MIT1002_02307	0.42	+0.8
2,574,633	-		MIT1002_02307	0.44	+1.1
2,574,676	+		MIT1002_02307	0.51	-1.4
2,574,787	+		MIT1002_02307	0.69	-0.0
2,574,845	-		MIT1002_02307	0.79	+0.3
2,574,878	-		MIT1002_02307	0.84	-1.3
2,575,003	-				+0.5
2,575,026	+				-0.0
2,575,026	+				+2.0
2,575,028	+				+1.1
2,575,034	-				-0.4
2,575,086	+				+0.6
2,575,087	+				+0.6
2,575,095	-				-0.5
2,575,160	-				+0.6
2,575,162	+				+1.1
2,575,162	+				+4.1
2,575,170	-				+2.4
2,575,204	+		MIT1002_02308	0.12	-0.7
2,575,204	+		MIT1002_02308	0.12	-0.0
2,575,204	+		MIT1002_02308	0.12	+0.1
2,575,204	+		MIT1002_02308	0.12	+1.5
2,575,204	+		MIT1002_02308	0.12	-0.3
2,575,212	-		MIT1002_02308	0.12	+0.8
2,575,212	-		MIT1002_02308	0.12	-0.2
2,575,212	-		MIT1002_02308	0.12	+0.0
2,575,212	-		MIT1002_02308	0.12	-0.2
2,575,212	-		MIT1002_02308	0.12	-0.4
2,575,241	-		MIT1002_02308	0.14	+2.4
2,575,246	+		MIT1002_02308	0.15	-0.0
2,575,271	+		MIT1002_02308	0.17	-1.2
2,575,289	-		MIT1002_02308	0.18	+3.1