Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02134

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,394,050	+				+2.0
2,394,179	-				+0.4
2,394,179	-				-0.7
2,394,325	-		MIT1002_02133	0.35	+0.9
2,394,384	+		MIT1002_02133	0.47	-0.7
2,394,384	+		MIT1002_02133	0.47	-1.7
2,394,387	-		MIT1002_02133	0.48	-2.5
2,394,456	+		MIT1002_02133	0.62	+0.4
2,394,456	+		MIT1002_02133	0.62	+0.1
2,394,524	+		MIT1002_02133	0.76	-1.2
2,394,612	-				+0.4
2,394,670	+				-0.4
2,394,740	-				+0.4
2,394,955	+		MIT1002_02134	0.13	-0.7
2,395,019	+		MIT1002_02134	0.16	-0.1
2,395,224	-		MIT1002_02134	0.24	+0.1
2,395,292	+		MIT1002_02134	0.27	-1.2
2,395,292	+		MIT1002_02134	0.27	-0.7
2,395,300	-		MIT1002_02134	0.27	+0.1
2,395,302	+		MIT1002_02134	0.27	-0.6
2,395,325	-		MIT1002_02134	0.28	+0.1
2,395,511	+		MIT1002_02134	0.36	+0.1
2,395,566	+		MIT1002_02134	0.38	-1.4
2,395,574	-		MIT1002_02134	0.38	+0.4
2,395,729	-		MIT1002_02134	0.45	+0.4
2,395,809	+		MIT1002_02134	0.48	-1.2
2,395,890	+		MIT1002_02134	0.51	-0.3
2,395,890	+		MIT1002_02134	0.51	-1.7
2,395,898	-		MIT1002_02134	0.51	-1.4
2,395,898	-		MIT1002_02134	0.51	-0.4
2,395,898	-		MIT1002_02134	0.51	+0.1
2,395,898	-		MIT1002_02134	0.51	+0.4
2,395,898	-		MIT1002_02134	0.51	-0.9
2,395,994	-		MIT1002_02134	0.55	-2.1
2,396,076	-		MIT1002_02134	0.59	+0.4
2,396,076	-		MIT1002_02134	0.59	-0.3
2,396,490	+		MIT1002_02134	0.76	-1.5
2,396,510	-		MIT1002_02134	0.76	-2.1
2,396,612	+		MIT1002_02134	0.81	-0.6
2,396,620	-		MIT1002_02134	0.81	-2.1
2,396,659	-		MIT1002_02134	0.82	-0.6
2,396,962	-				+0.4
2,397,073	+				-0.1
2,397,193	+		MIT1002_02135	0.45	-1.4
2,397,208	-		MIT1002_02135	0.52	+0.7
2,397,364	+				+0.3
2,397,364	+				-1.7
2,397,393	+		MIT1002_02136	0.13	-1.4
2,397,401	-		MIT1002_02136	0.14	-1.5
2,397,431	+		MIT1002_02136	0.19	+0.4
2,397,433	+		MIT1002_02136	0.19	-1.1
2,397,433	+		MIT1002_02136	0.19	-0.7
2,397,434	-		MIT1002_02136	0.19	-0.9
2,397,441	-		MIT1002_02136	0.20	-0.3
2,397,468	+		MIT1002_02136	0.25	+0.7
2,397,518	+		MIT1002_02136	0.32	-1.6
2,397,552	-		MIT1002_02136	0.37	-1.7
2,397,599	+		MIT1002_02136	0.44	-1.2
2,397,599	+		MIT1002_02136	0.44	-0.3
2,397,609	+		MIT1002_02136	0.46	-0.1
2,397,618	-		MIT1002_02136	0.47	-1.0
2,397,618	-		MIT1002_02136	0.47	-0.6
2,397,727	+		MIT1002_02136	0.64	-0.1
2,397,742	+		MIT1002_02136	0.66	-0.9
2,397,750	-		MIT1002_02136	0.67	-0.9
2,397,847	+		MIT1002_02136	0.82	-0.9
2,397,992	+				-2.0
2,397,992	+				+0.5
2,397,992	+				-0.8
2,398,072	-				-1.4