Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02128

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,389,043	-		MIT1002_02126	0.16	+0.3
2,389,121	+		MIT1002_02126	0.32	-2.6
2,389,138	+		MIT1002_02126	0.35	-2.8
2,389,204	-		MIT1002_02126	0.49	-0.6
2,389,486	+				-1.9
2,389,696	-		MIT1002_02127	0.54	-2.5
2,389,811	+		MIT1002_02127	0.78	-0.8
2,389,836	+		MIT1002_02127	0.84	-3.6
2,389,845	+		MIT1002_02127	0.85	+0.4
2,389,845	+		MIT1002_02127	0.85	-1.2
2,389,845	+		MIT1002_02127	0.85	-0.2
2,389,845	+		MIT1002_02127	0.85	-1.5
2,389,845	+		MIT1002_02127	0.85	-1.6
2,389,845	+		MIT1002_02127	0.85	-0.1
2,389,845	+		MIT1002_02127	0.85	+0.6
2,389,845	+		MIT1002_02127	0.85	+0.4
2,389,853	-		MIT1002_02127	0.87	+0.0
2,389,853	-		MIT1002_02127	0.87	-0.9
2,389,853	-		MIT1002_02127	0.87	-0.1
2,389,853	-		MIT1002_02127	0.87	-0.9
2,389,853	-		MIT1002_02127	0.87	-2.2
2,389,853	-		MIT1002_02127	0.87	+0.7
2,389,857	+		MIT1002_02127	0.88	+0.5
2,389,858	+		MIT1002_02127	0.88	-1.5
2,390,016	+				+1.7
2,390,043	-				-0.1
2,390,106	+		MIT1002_02128	0.14	-1.5
2,390,125	-		MIT1002_02128	0.18	+0.7
2,390,135	+		MIT1002_02128	0.20	-0.9
2,390,205	+		MIT1002_02128	0.35	+0.1
2,390,364	+		MIT1002_02128	0.68	-0.6
2,390,427	+		MIT1002_02128	0.81	-2.0
2,390,434	-		MIT1002_02128	0.83	-2.7
2,390,550	+				-0.3
2,390,558	-				+0.3
2,390,558	-				+0.6
2,390,594	+				-0.9
2,390,931	+		MIT1002_02129	0.13	-1.3
2,391,098	-		MIT1002_02129	0.25	-1.4
2,391,124	+		MIT1002_02129	0.26	+0.1
2,391,159	+		MIT1002_02129	0.29	-1.6
2,391,415	+		MIT1002_02129	0.47	-0.3
2,391,480	+		MIT1002_02129	0.51	-1.2
2,391,488	-		MIT1002_02129	0.52	-1.2