Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02119

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,380,881	+				-0.8
2,380,881	+				-1.1
2,380,881	+				+0.1
2,380,887	+				+1.4
2,380,887	+				+0.3
2,380,888	+				-1.4
2,380,888	+				+1.2
2,380,888	+				-0.1
2,380,888	+				-0.2
2,380,888	+				+0.3
2,380,888	+				-1.3
2,380,888	+				+0.5
2,380,888	+				+2.2
2,380,888	+				-0.5
2,380,888	+				-0.6
2,380,888	+				+0.5
2,380,888	+				+0.7
2,380,888	+				+0.0
2,380,888	-				-2.4
2,380,889	-				-0.5
2,380,895	-				+1.0
2,380,896	-				+0.9
2,380,896	-				+1.2
2,380,896	-				-1.2
2,380,896	-				+0.2
2,380,896	-				+0.3
2,380,896	-				+1.0
2,380,896	-				-1.7
2,380,896	-				-1.0
2,380,896	-				-3.0
2,380,896	-				-0.7
2,380,896	-				+0.7
2,380,896	-				+0.7
2,380,945	+				-0.9
2,380,951	+				+0.5
2,380,952	+				-0.9
2,380,952	+				-2.6
2,380,952	+				+0.7
2,380,952	+				-0.9
2,380,952	+				+0.5
2,380,952	+				-0.9
2,380,959	-				-2.2
2,380,960	-				+1.1
2,380,960	-				+0.4
2,380,960	-				-0.5
2,380,960	-				+0.0
2,380,960	-				-2.3
2,380,960	-				-1.3
2,380,960	-				-2.0
2,380,969	+				-0.7
2,380,998	+				+2.5
2,381,006	-				+0.5
2,381,029	-				-0.2
2,381,053	-				+1.0
2,381,072	-				+4.3
2,381,085	-				-0.2
2,381,085	-				+0.9
2,381,094	+				+0.9
2,381,102	+				-0.0
2,381,102	+				+0.1
2,381,102	-				-2.4
2,381,109	+				-1.2
2,381,110	-				+1.1
2,381,110	-				+0.9
2,381,122	-				+2.3
2,381,148	+				-0.6
2,381,159	+				-1.5
2,381,159	+				-0.6
2,381,159	+				-0.1
2,381,159	+				-2.3
2,381,159	+				-2.3
2,381,159	+				-0.9
2,381,159	+				-1.1
2,381,159	+				-1.1
2,381,159	+				-0.9
2,381,159	+				-1.1
2,381,159	+				-2.6
2,381,159	+				-1.2
2,381,159	+				-0.4
2,381,159	+				-0.7
2,381,167	-				-1.7
2,381,167	-				-0.7
2,381,167	-				-0.3
2,381,167	-				+3.6
2,381,167	-				-1.7
2,381,167	-				+0.1
2,381,167	-				+1.1
2,381,167	-				+1.5
2,381,167	-				-0.5
2,381,167	-				+0.1
2,381,167	-				+3.6
2,381,167	-				+1.1
2,381,167	-				+0.7
2,381,167	-				-0.4
2,381,167	-				-2.1
2,381,169	+				-2.4
2,381,169	+				+0.1
2,381,169	+				+1.0
2,381,169	+				-1.9
2,381,169	+				+1.0
2,381,169	+				-0.1
2,381,169	+				+0.5
2,381,169	+				+0.7
2,381,169	+				+1.0
2,381,169	+				+1.4
2,381,169	+				+1.1
2,381,169	+				+0.4
2,381,169	+				-2.5
2,381,177	-				+1.0
2,381,177	-				-0.6
2,381,177	-				-1.2
2,381,177	-				-2.2
2,381,177	-				-1.9
2,381,177	-				+0.1
2,381,177	-				+0.4
2,381,177	-				-1.7
2,381,177	-				-1.0
2,381,177	-				-1.2
2,381,177	-				+1.0
2,381,177	-				-1.1
2,381,177	-				+0.6
2,381,179	+				+0.3
2,381,184	+				-0.0
2,381,189	+				-1.5
2,381,189	+				-1.1
2,381,189	+				-0.4
2,381,190	-				-1.7
2,381,192	-				+2.1
2,381,197	-				+0.7
2,381,197	-				-0.5
2,381,197	-				+0.7
2,381,197	-				+0.6
2,381,197	-				+1.2
2,381,200	-				+0.6
2,381,202	-				+0.9
2,381,202	-				-2.2
2,381,202	-				+1.3
2,381,206	+				+0.9
2,381,206	+				-0.5
2,381,209	-				+0.5
2,381,213	-				+0.7
2,381,216	+				+0.1
2,381,221	+				+2.2
2,381,224	+				-1.3
2,381,226	+				-0.6
2,381,226	+				+1.4
2,381,226	+				+1.1
2,381,233	+				-3.0
2,381,233	+				-1.1
2,381,233	+				+0.6
2,381,233	+				-1.5
2,381,234	-				-0.8
2,381,234	-				-0.8
2,381,234	-				-0.7
2,381,234	-				+0.0
2,381,234	-				+2.0
2,381,234	-				-0.4
2,381,234	-				+0.3
2,381,234	-				-2.9
2,381,234	-				+2.0
2,381,234	-				-0.5
2,381,234	-				+1.6
2,381,234	-				-0.0
2,381,236	+				-2.5
2,381,236	+				+0.5
2,381,236	-				-1.8
2,381,241	-				-1.2
2,381,241	-				-1.4
2,381,241	-				+1.9
2,381,241	-				+0.2
2,381,241	-				-0.9
2,381,241	-				+0.5
2,381,242	-				+1.5
2,381,247	-				+2.6
2,381,247	-				-0.3
2,381,258	-				+1.5
2,381,261	+				-1.9
2,381,274	+				+1.4
2,381,281	+				+0.3
2,381,281	+				-0.7
2,381,282	+				-0.0
2,381,282	+				+2.2
2,381,282	+				-0.3
2,381,282	+				-0.2
2,381,282	+				+0.5
2,381,282	+				+1.6
2,381,282	+				-0.6
2,381,282	+				+1.0
2,381,282	+				-1.0
2,381,282	+				-0.1
2,381,282	+				-0.6
2,381,282	+				-2.1
2,381,282	+				+1.2
2,381,282	+				-1.6
2,381,282	+				+1.3
2,381,282	-				+2.0
2,381,282	-				+0.2
2,381,289	+				+0.2
2,381,289	-				+0.6
2,381,289	-				+2.7
2,381,289	-				-1.4
2,381,290	-				-2.8
2,381,290	-				-0.4
2,381,290	-				-0.8
2,381,290	-				-0.7
2,381,290	-				-0.2
2,381,290	-				-0.6
2,381,290	-				+1.3
2,381,290	-				-2.2
2,381,290	-				-0.1
2,381,290	-				+1.6
2,381,290	-				+0.1
2,381,290	-				+0.1
2,381,290	-				+1.1
2,381,290	-				+1.5
2,381,290	-				+1.9
2,381,374	+				+0.3
2,381,431	+				-0.4
2,381,507	-				+0.0
2,381,551	+				-0.9
2,381,553	+				+2.0
2,381,553	+				+1.6
2,381,553	+				-1.0
2,381,553	+				-1.1
2,381,553	+				+0.6
2,381,553	+				-1.5
2,381,553	+				+0.9
2,381,561	-				+1.3
2,381,567	-				-2.0
2,381,567	-				-0.3
2,381,567	-				+0.5
2,381,567	-				+1.2
2,381,577	+				+0.5
2,381,612	-				+0.3
2,381,661	+				-0.5
2,381,718	+				-1.4
2,381,820	+				+1.0
2,381,828	-				+0.3
2,381,842	-				+1.4
2,381,858	+				+0.5
2,381,858	+				+0.4
2,381,866	-				-1.3
2,381,866	-				-1.2
2,381,868	+				-2.5
2,381,914	-				+0.4
2,381,920	+				+1.4
2,381,930	+				-1.3
2,381,944	-				-0.9
2,381,966	+		MIT1002_02119	0.11	-0.8
2,381,968	+		MIT1002_02119	0.11	-3.2
2,381,981	+		MIT1002_02119	0.12	+1.0
2,381,981	-		MIT1002_02119	0.12	+1.2
2,382,002	+		MIT1002_02119	0.14	+1.4
2,382,144	-		MIT1002_02119	0.25	-0.7
2,382,199	+		MIT1002_02119	0.30	-1.5
2,382,214	+		MIT1002_02119	0.31	-0.6
2,382,214	+		MIT1002_02119	0.31	-2.0
2,382,214	+		MIT1002_02119	0.31	-1.4
2,382,214	+		MIT1002_02119	0.31	-1.7
2,382,214	+		MIT1002_02119	0.31	-0.3
2,382,214	+		MIT1002_02119	0.31	-1.0
2,382,214	+		MIT1002_02119	0.31	+0.1
2,382,214	+		MIT1002_02119	0.31	+1.9
2,382,222	-		MIT1002_02119	0.32	-2.0
2,382,222	-		MIT1002_02119	0.32	-0.7
2,382,222	-		MIT1002_02119	0.32	+0.1
2,382,222	-		MIT1002_02119	0.32	-0.2
2,382,222	-		MIT1002_02119	0.32	-1.1
2,382,222	-		MIT1002_02119	0.32	-0.5
2,382,222	-		MIT1002_02119	0.32	+0.5
2,382,227	+		MIT1002_02119	0.32	-1.1
2,382,238	-		MIT1002_02119	0.33	+0.4
2,382,245	+		MIT1002_02119	0.34	+0.2
2,382,245	+		MIT1002_02119	0.34	-1.5
2,382,253	-		MIT1002_02119	0.35	-0.1
2,382,282	+		MIT1002_02119	0.37	+0.1
2,382,318	+		MIT1002_02119	0.40	+1.5
2,382,458	+		MIT1002_02119	0.52	+0.0
2,382,465	+		MIT1002_02119	0.52	-3.0
2,382,473	-		MIT1002_02119	0.53	-0.0
2,382,501	-		MIT1002_02119	0.55	+1.0
2,382,519	+		MIT1002_02119	0.57	+0.8
2,382,519	+		MIT1002_02119	0.57	+0.3
2,382,572	+		MIT1002_02119	0.61	+0.8
2,382,573	+		MIT1002_02119	0.61	-1.6
2,382,581	-		MIT1002_02119	0.62	-0.7
2,382,585	-		MIT1002_02119	0.62	-0.2
2,382,585	-		MIT1002_02119	0.62	-0.1
2,382,585	-		MIT1002_02119	0.62	+0.6
2,382,591	-		MIT1002_02119	0.63	-1.0
2,382,685	+		MIT1002_02119	0.71	+0.4
2,382,688	-		MIT1002_02119	0.71	-2.6
2,382,740	-		MIT1002_02119	0.75	-1.0
2,382,787	-		MIT1002_02119	0.79	-0.2
2,382,824	+		MIT1002_02119	0.82	-0.3
2,382,880	-		MIT1002_02119	0.87	-0.3
2,382,889	-		MIT1002_02119	0.88	+1.1
2,382,941	-				+0.2
2,382,941	-				-0.5
2,382,979	-				-0.7
2,383,109	+				+0.6
2,383,109	-				-1.2
2,383,264	-				+0.2
2,383,332	-		MIT1002_02120	0.26	+0.4
2,383,341	-		MIT1002_02120	0.29	-0.7
2,383,362	-		MIT1002_02120	0.35	-0.5
2,383,399	-		MIT1002_02120	0.45	+2.4
2,383,562	+				-2.1
2,383,629	+				-1.9
2,383,647	-				+1.2
2,383,664	+				-1.1
2,383,664	+				-2.2
2,383,664	+				-0.2
2,383,664	+				-0.1
2,383,672	-		MIT1002_02121	0.12	-0.0
2,383,672	-		MIT1002_02121	0.12	-0.6
2,383,672	-		MIT1002_02121	0.12	+0.7
2,383,672	-		MIT1002_02121	0.12	-1.3
2,383,672	-		MIT1002_02121	0.12	+0.9
2,383,674	+		MIT1002_02121	0.13	-1.5
2,383,682	-		MIT1002_02121	0.15	+1.6
2,383,682	-		MIT1002_02121	0.15	-1.5
2,383,682	-		MIT1002_02121	0.15	+0.7
2,383,732	+		MIT1002_02121	0.29	-0.1
2,383,747	-		MIT1002_02121	0.33	-0.7
2,383,765	+		MIT1002_02121	0.38	-0.7
2,383,773	-		MIT1002_02121	0.40	-0.7
2,383,773	-		MIT1002_02121	0.40	-0.1
2,383,863	+		MIT1002_02121	0.66	-0.9
2,383,915	+		MIT1002_02121	0.80	-0.4
2,383,944	+		MIT1002_02121	0.88	-1.0
2,383,948	-		MIT1002_02121	0.89	+0.4
2,384,013	-				-0.3
2,384,013	-				-1.2
2,384,033	-				+3.7