Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02100

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,360,977	+		MIT1002_02099	0.10	-1.0
2,361,016	-		MIT1002_02099	0.14	-2.2
2,361,021	-		MIT1002_02099	0.15	+0.4
2,361,054	-		MIT1002_02099	0.18	+0.4
2,361,140	+		MIT1002_02099	0.26	-1.3
2,361,237	+		MIT1002_02099	0.36	-0.0
2,361,237	+		MIT1002_02099	0.36	+0.1
2,361,245	-		MIT1002_02099	0.37	-0.4
2,361,245	-		MIT1002_02099	0.37	-2.1
2,361,358	-		MIT1002_02099	0.48	+1.5
2,361,390	-		MIT1002_02099	0.51	+0.2
2,361,435	+		MIT1002_02099	0.55	+3.6
2,361,498	+		MIT1002_02099	0.61	-3.5
2,361,519	-		MIT1002_02099	0.63	-1.1
2,361,558	-		MIT1002_02099	0.67	-0.3
2,361,568	+		MIT1002_02099	0.68	+0.8
2,361,583	-		MIT1002_02099	0.69	+0.4
2,361,598	+		MIT1002_02099	0.71	+0.5
2,361,631	+		MIT1002_02099	0.74	-1.0
2,361,631	+		MIT1002_02099	0.74	-0.6
2,361,639	-		MIT1002_02099	0.75	-1.2
2,361,639	-		MIT1002_02099	0.75	+0.4
2,361,639	-		MIT1002_02099	0.75	+0.1
2,361,655	+		MIT1002_02099	0.76	+0.7
2,361,676	+		MIT1002_02099	0.78	+0.8
2,361,686	+		MIT1002_02099	0.79	+1.0
2,361,686	+		MIT1002_02099	0.79	+0.2
2,361,689	+		MIT1002_02099	0.80	-1.5
2,361,694	-		MIT1002_02099	0.80	-1.4
2,361,720	+		MIT1002_02099	0.83	+0.7
2,361,730	+		MIT1002_02099	0.84	+1.2
2,361,730	+		MIT1002_02099	0.84	+1.0
2,361,730	+		MIT1002_02099	0.84	+1.1
2,361,738	-		MIT1002_02099	0.84	-2.2
2,361,738	-		MIT1002_02099	0.84	+0.8
2,361,738	-		MIT1002_02099	0.84	-1.3
2,361,738	-		MIT1002_02099	0.84	+3.5
2,361,821	-				+1.9
2,361,971	-				-1.3
2,362,130	-		MIT1002_02100	0.29	-0.5
2,362,224	+		MIT1002_02100	0.41	+0.1
2,362,224	+		MIT1002_02100	0.41	+1.6
2,362,224	+		MIT1002_02100	0.41	-2.6
2,362,232	-		MIT1002_02100	0.42	+0.4
2,362,232	-		MIT1002_02100	0.42	+1.0
2,362,256	-		MIT1002_02100	0.45	+0.2
2,362,276	-		MIT1002_02100	0.48	+0.3
2,362,504	+		MIT1002_02100	0.77	+1.3
2,362,506	+		MIT1002_02100	0.77	+1.1
2,362,644	-				-0.4
2,362,664	-				-3.1
2,362,725	-		MIT1002_02101	0.11	-3.0
2,362,726	-		MIT1002_02101	0.12	-4.0
2,362,726	-		MIT1002_02101	0.12	-0.1
2,362,759	+		MIT1002_02101	0.29	+0.8
2,362,786	+		MIT1002_02101	0.43	+2.6
2,362,786	+		MIT1002_02101	0.43	+0.6
2,362,794	-		MIT1002_02101	0.47	-2.2
2,362,794	-		MIT1002_02101	0.47	+1.6
2,362,794	-		MIT1002_02101	0.47	+2.5
2,362,938	+				-0.3
2,362,938	+				+0.8
2,362,964	+				-0.9
2,363,031	+				+1.2
2,363,039	-				-0.9
2,363,047	-		MIT1002_02102	0.11	+1.4
2,363,057	-		MIT1002_02102	0.12	+0.1
2,363,095	+		MIT1002_02102	0.18	+0.2
2,363,095	+		MIT1002_02102	0.18	-1.0
2,363,103	-		MIT1002_02102	0.19	-1.5
2,363,115	-		MIT1002_02102	0.21	-0.5
2,363,115	-		MIT1002_02102	0.21	-1.0
2,363,310	+		MIT1002_02102	0.52	+1.1
2,363,317	-		MIT1002_02102	0.53	+0.1
2,363,322	-		MIT1002_02102	0.54	-1.5
2,363,347	+		MIT1002_02102	0.58	+1.0
2,363,355	-		MIT1002_02102	0.59	-0.7
2,363,438	+		MIT1002_02102	0.72	-0.2
2,363,455	+		MIT1002_02102	0.75	-2.5
2,363,567	+				-0.5
2,363,590	+				+0.4
2,363,598	-				+0.5
2,363,674	+				+1.0