Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02095

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,355,926	-		MIT1002_02094	0.15	-0.3
2,356,137	+		MIT1002_02094	0.38	+0.3
2,356,138	-		MIT1002_02094	0.38	+1.7
2,356,148	-		MIT1002_02094	0.39	+0.2
2,356,195	-		MIT1002_02094	0.44	-3.1
2,356,248	+		MIT1002_02094	0.50	+1.1
2,356,276	+		MIT1002_02094	0.53	-0.1
2,356,341	-		MIT1002_02094	0.60	-0.2
2,356,411	+		MIT1002_02094	0.68	-0.6
2,356,414	+		MIT1002_02094	0.68	+0.4
2,356,530	-		MIT1002_02094	0.81	+2.9
2,356,611	+		MIT1002_02094	0.90	+0.6
2,356,696	+				+0.2
2,356,857	-				-1.5
2,356,862	-				+0.6
2,356,904	+				-0.3
2,356,912	-				+0.2
2,356,912	-				+0.7
2,356,912	-				-0.7
2,356,912	-				+1.3
2,356,913	-				-2.4
2,357,019	+		MIT1002_02095	0.16	+0.7
2,357,225	-		MIT1002_02095	0.30	+0.1
2,357,282	+		MIT1002_02095	0.34	+1.8
2,357,290	-		MIT1002_02095	0.35	+1.7
2,357,290	-		MIT1002_02095	0.35	-0.0
2,357,308	+		MIT1002_02095	0.36	+0.5
2,357,316	-		MIT1002_02095	0.37	+0.4
2,357,316	-		MIT1002_02095	0.37	-0.6
2,357,316	-		MIT1002_02095	0.37	-1.9
2,357,316	-		MIT1002_02095	0.37	-1.1
2,357,340	+		MIT1002_02095	0.38	+0.2
2,357,375	-		MIT1002_02095	0.41	+0.8
2,357,448	-		MIT1002_02095	0.46	+1.0
2,357,500	+		MIT1002_02095	0.49	-0.7
2,357,519	+		MIT1002_02095	0.51	-1.0
2,357,658	+		MIT1002_02095	0.60	+0.4
2,357,682	-		MIT1002_02095	0.62	+0.3
2,357,721	+		MIT1002_02095	0.64	-0.2
2,357,722	+		MIT1002_02095	0.64	-1.8
2,357,722	+		MIT1002_02095	0.64	-0.1
2,357,775	+		MIT1002_02095	0.68	-0.9
2,357,783	-		MIT1002_02095	0.69	-2.6
2,357,783	-		MIT1002_02095	0.69	-1.5
2,357,783	-		MIT1002_02095	0.69	+0.1
2,357,783	-		MIT1002_02095	0.69	+0.7
2,357,892	+		MIT1002_02095	0.76	-2.5
2,357,916	-		MIT1002_02095	0.78	-0.0
2,357,922	-		MIT1002_02095	0.78	-2.4
2,357,928	+		MIT1002_02095	0.79	-0.7
2,358,023	+		MIT1002_02095	0.85	-1.8
2,358,026	-		MIT1002_02095	0.85	+0.1
2,358,031	-		MIT1002_02095	0.86	-1.2
2,358,062	+		MIT1002_02095	0.88	-1.4
2,358,186	+				+1.9
2,358,223	+				+1.2
2,358,228	+				-1.9
2,358,379	+		MIT1002_02096	0.10	+0.7
2,358,398	+		MIT1002_02096	0.13	-0.3
2,358,403	+		MIT1002_02096	0.13	+0.8
2,358,513	+		MIT1002_02096	0.27	-0.4
2,358,547	+		MIT1002_02096	0.31	-0.6
2,358,724	+		MIT1002_02096	0.52	+2.2
2,358,751	+		MIT1002_02096	0.55	-0.5
2,358,829	-		MIT1002_02096	0.65	+0.4
2,358,888	+		MIT1002_02096	0.72	-0.6
2,358,901	-		MIT1002_02096	0.73	+0.7
2,358,955	+		MIT1002_02096	0.80	-1.0
2,358,963	-		MIT1002_02096	0.81	+0.5
2,358,974	+		MIT1002_02096	0.82	+1.5
2,358,982	-		MIT1002_02096	0.83	-0.0
2,359,086	-				+0.5
2,359,164	+				+1.2