Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02008

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,242,672	+		MIT1002_02006	0.85	-0.8
2,242,733	+		MIT1002_02006	0.90	-2.8
2,242,736	-		MIT1002_02006	0.90	+1.5
2,242,812	+				-0.3
2,242,812	+				-0.5
2,242,812	+				+0.8
2,242,812	+				-0.8
2,242,812	+				+0.1
2,242,812	+				+0.1
2,242,820	-				+0.2
2,242,820	-				-0.2
2,242,820	-				+1.0
2,242,820	-				+1.1
2,242,820	-				+3.4
2,242,820	-				-2.1
2,242,820	-				+1.0
2,242,932	+				+0.4
2,242,945	-				+0.1
2,243,011	-				+0.3
2,243,027	+				-0.9
2,243,167	+		MIT1002_02007	0.24	+1.8
2,243,167	+		MIT1002_02007	0.24	+0.3
2,243,175	-		MIT1002_02007	0.25	+1.1
2,243,259	-		MIT1002_02007	0.40	+0.3
2,243,426	+		MIT1002_02007	0.69	-0.4
2,243,450	+		MIT1002_02007	0.73	+0.9
2,243,505	-		MIT1002_02007	0.83	-0.1
2,243,505	-		MIT1002_02007	0.83	+1.8
2,243,549	+				+2.6
2,243,549	+				-0.7
2,243,549	+				+0.1
2,243,557	-				+0.4
2,243,557	-				+1.4
2,243,557	-				+1.8
2,243,557	-				-1.3
2,243,557	-				-2.9
2,243,559	+				-0.6
2,243,559	+				-0.3
2,243,559	+				+0.8
2,243,567	-				+0.7
2,243,610	+				-1.0
2,243,626	-				+0.3
2,243,651	+				-0.2
2,243,703	+				-2.6
2,243,703	-				-3.5
2,243,865	-		MIT1002_02008	0.14	-5.9
2,243,940	-		MIT1002_02008	0.19	-0.8
2,244,018	+		MIT1002_02008	0.25	-0.5
2,244,045	+		MIT1002_02008	0.26	-4.2
2,244,053	-		MIT1002_02008	0.27	-5.2
2,244,146	-		MIT1002_02008	0.33	-4.0
2,244,159	+		MIT1002_02008	0.34	-3.1
2,244,167	-		MIT1002_02008	0.35	-2.1
2,244,179	+		MIT1002_02008	0.36	-0.5
2,244,205	+		MIT1002_02008	0.38	-4.6
2,244,205	+		MIT1002_02008	0.38	-2.8
2,244,205	+		MIT1002_02008	0.38	-2.8
2,244,211	-		MIT1002_02008	0.38	-3.3
2,244,213	-		MIT1002_02008	0.38	-2.5
2,244,213	-		MIT1002_02008	0.38	-3.0
2,244,213	-		MIT1002_02008	0.38	-0.3
2,244,230	+		MIT1002_02008	0.39	-2.8
2,244,293	-		MIT1002_02008	0.44	-2.7
2,244,343	+		MIT1002_02008	0.47	-3.0
2,244,376	+		MIT1002_02008	0.49	-1.2
2,244,384	-		MIT1002_02008	0.50	-2.9
2,244,704	-		MIT1002_02008	0.72	-1.7
2,244,754	-		MIT1002_02008	0.76	-1.0
2,244,859	+		MIT1002_02008	0.83	-5.4
2,244,866	-		MIT1002_02008	0.83	-2.7
2,244,954	+		MIT1002_02008	0.90	-2.0
2,244,964	+				-2.0
2,244,964	+				-6.1
2,244,984	-				-3.6
2,245,009	+				-0.9
2,245,014	+				+0.7
2,245,141	-				-1.6
2,245,284	+				-0.5
2,245,284	+				-2.2
2,245,311	-				+0.4