Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02003

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,237,808	-				+0.1
2,237,896	-		MIT1002_02002	0.16	+0.4
2,237,919	+		MIT1002_02002	0.19	-2.7
2,237,919	+		MIT1002_02002	0.19	+0.6
2,237,925	+		MIT1002_02002	0.19	+2.2
2,237,927	-		MIT1002_02002	0.20	+0.6
2,237,933	-		MIT1002_02002	0.20	+2.0
2,237,968	-		MIT1002_02002	0.24	+2.0
2,238,037	-		MIT1002_02002	0.32	-2.6
2,238,184	+		MIT1002_02002	0.49	-1.1
2,238,315	+		MIT1002_02002	0.64	-2.0
2,238,369	-		MIT1002_02002	0.70	-0.6
2,238,373	+		MIT1002_02002	0.70	+0.8
2,238,391	-		MIT1002_02002	0.72	+1.9
2,238,589	-				+0.3
2,238,760	+		MIT1002_02003	0.11	-0.3
2,238,760	+		MIT1002_02003	0.11	+1.3
2,238,768	-		MIT1002_02003	0.12	+0.4
2,238,771	+		MIT1002_02003	0.13	-1.8
2,238,802	-		MIT1002_02003	0.17	+3.3
2,238,816	-		MIT1002_02003	0.19	+1.5
2,238,816	-		MIT1002_02003	0.19	-0.3
2,238,979	-		MIT1002_02003	0.40	-1.0
2,239,027	-		MIT1002_02003	0.46	+0.5
2,239,130	+		MIT1002_02003	0.60	-2.8
2,239,175	+		MIT1002_02003	0.66	+0.8
2,239,180	+		MIT1002_02003	0.67	+0.7
2,239,180	+		MIT1002_02003	0.67	-0.2
2,239,183	-		MIT1002_02003	0.67	+1.0
2,239,273	-		MIT1002_02003	0.79	-0.6
2,239,314	-		MIT1002_02003	0.84	+1.2
2,239,325	+		MIT1002_02003	0.86	+1.0
2,239,325	+		MIT1002_02003	0.86	+1.8
2,239,325	+		MIT1002_02003	0.86	-0.8
2,239,483	-				+0.7
2,239,493	-				-0.4
2,239,566	-				-1.2
2,239,582	+				-1.3
2,239,582	+				+0.5
2,239,582	+				-0.3
2,239,648	-		MIT1002_02004	0.17	-2.9
2,239,680	+		MIT1002_02004	0.21	-2.5
2,239,680	-		MIT1002_02004	0.21	+0.0
2,239,719	+		MIT1002_02004	0.27	+1.0
2,239,811	-		MIT1002_02004	0.40	+0.3
2,239,815	+		MIT1002_02004	0.41	+0.5
2,239,857	+		MIT1002_02004	0.47	+0.7
2,239,895	+		MIT1002_02004	0.52	-1.0
2,239,938	-		MIT1002_02004	0.58	-3.1
2,240,070	+		MIT1002_02004	0.77	+0.7
2,240,168	+				+0.9
2,240,180	+				+1.4
2,240,239	+				+2.0
2,240,239	+				+0.1
2,240,239	+				+0.2
2,240,271	-				+0.4
2,240,273	+				-2.0
2,240,295	-				-1.0
2,240,413	-				+0.6
2,240,423	+				-0.2
2,240,423	+				-1.8
2,240,433	+				-2.1