Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01995

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,229,907	+				+0.7
2,229,927	+				+0.4
2,229,990	-				+1.1
2,230,115	-				+0.4
2,230,151	-				-0.8
2,230,165	+				-0.6
2,230,173	-				+0.2
2,230,177	+				+0.5
2,230,184	-		MIT1002_01994	0.10	+1.4
2,230,237	+		MIT1002_01994	0.20	+1.0
2,230,272	-		MIT1002_01994	0.26	-0.6
2,230,337	+		MIT1002_01994	0.38	+0.2
2,230,368	-		MIT1002_01994	0.43	-1.7
2,230,394	-		MIT1002_01994	0.48	-1.4
2,230,430	-		MIT1002_01994	0.54	+0.4
2,230,452	-		MIT1002_01994	0.58	-0.8
2,230,505	-		MIT1002_01994	0.68	-1.6
2,230,562	+		MIT1002_01994	0.78	+1.2
2,230,592	+		MIT1002_01994	0.84	+2.1
2,230,720	-				+0.3
2,230,809	-				-1.4
2,230,823	+				+0.4
2,230,823	+				-0.8
2,230,831	-				+1.6
2,230,914	+				+0.1
2,230,969	-		MIT1002_01995	0.14	-2.1
2,230,969	-		MIT1002_01995	0.14	-1.9
2,230,988	-		MIT1002_01995	0.16	-2.9
2,231,091	-		MIT1002_01995	0.26	-1.0
2,231,136	+		MIT1002_01995	0.31	-3.5
2,231,144	-		MIT1002_01995	0.31	-1.3
2,231,180	-		MIT1002_01995	0.35	-2.0
2,231,202	+		MIT1002_01995	0.37	-3.7
2,231,210	-		MIT1002_01995	0.38	-1.1
2,231,330	-		MIT1002_01995	0.50	-1.5
2,231,356	+		MIT1002_01995	0.53	-1.0
2,231,356	+		MIT1002_01995	0.53	-2.6
2,231,356	+		MIT1002_01995	0.53	-3.3
2,231,364	-		MIT1002_01995	0.53	-2.7
2,231,364	-		MIT1002_01995	0.53	-2.3
2,231,374	-		MIT1002_01995	0.54	-0.9
2,231,375	-		MIT1002_01995	0.55	-0.7
2,231,423	+		MIT1002_01995	0.59	-3.1
2,231,447	+		MIT1002_01995	0.62	-1.6
2,231,462	-		MIT1002_01995	0.63	+0.1
2,231,462	-		MIT1002_01995	0.63	+0.7
2,231,558	-		MIT1002_01995	0.73	-2.6
2,231,568	-		MIT1002_01995	0.74	-1.6
2,231,606	+		MIT1002_01995	0.78	-4.1
2,231,624	-		MIT1002_01995	0.80	-3.1
2,231,752	-				-0.6
2,231,782	+				+0.9
2,231,807	-				-1.1
2,231,821	+				+0.1
2,231,844	+				+0.5
2,231,852	-				-0.5
2,231,852	-				+1.2
2,231,860	-				+0.3
2,231,898	-				+0.5
2,231,991	-		MIT1002_01996	0.43	+1.9
2,232,040	+		MIT1002_01996	0.63	-1.8
2,232,076	-		MIT1002_01996	0.78	+0.4
2,232,204	-				+0.4
2,232,204	-				-0.1
2,232,213	-				-1.3
2,232,316	-				-2.7
2,232,331	+				+1.1
2,232,334	-				-2.1
2,232,426	+				-0.3
2,232,496	-				-0.1
2,232,506	-				+2.5
2,232,540	+				-1.2
2,232,548	-				+1.5
2,232,805	-		MIT1002_01997	0.16	+2.5